Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SspnQ62147 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SspnQ62147 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SspnQ62147 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SspnQ62147 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SspnQ62147 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SspnQ62147 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SspnQ62147 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.08■□□□□ 0.17
SspnQ62147 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC16.08■□□□□ 0.16
SspnQ62147 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SspnQ62147 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SspnQ62147 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SspnQ62147 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SspnQ62147 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SspnQ62147 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SspnQ62147 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SspnQ62147 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SspnQ62147 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SspnQ62147 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SspnQ62147 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SspnQ62147 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC16.07■□□□□ 0.16
SspnQ62147 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SspnQ62147 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SspnQ62147 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.07■□□□□ 0.16
SspnQ62147 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SspnQ62147 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SspnQ62147 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SspnQ62147 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
SspnQ62147 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.06■□□□□ 0.16
SspnQ62147 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SspnQ62147 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
SspnQ62147 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.06■□□□□ 0.16
SspnQ62147 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SspnQ62147 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SspnQ62147 Gm9207-201ENSMUST00000198773 1115 ntBASIC16.06■□□□□ 0.16
SspnQ62147 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SspnQ62147 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SspnQ62147 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SspnQ62147 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.06■□□□□ 0.16
SspnQ62147 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SspnQ62147 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SspnQ62147 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.05■□□□□ 0.16
SspnQ62147 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SspnQ62147 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC16.05■□□□□ 0.16
SspnQ62147 Gm12922-201ENSMUST00000120626 809 ntBASIC16.05■□□□□ 0.16
SspnQ62147 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC16.05■□□□□ 0.16
SspnQ62147 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC16.05■□□□□ 0.16
SspnQ62147 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SspnQ62147 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SspnQ62147 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SspnQ62147 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SspnQ62147 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SspnQ62147 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SspnQ62147 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SspnQ62147 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SspnQ62147 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SspnQ62147 Gm6085-201ENSMUST00000182774 1470 ntBASIC16.04■□□□□ 0.16
SspnQ62147 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SspnQ62147 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SspnQ62147 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SspnQ62147 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SspnQ62147 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC16.04■□□□□ 0.16
SspnQ62147 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SspnQ62147 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SspnQ62147 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SspnQ62147 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.04■□□□□ 0.16
SspnQ62147 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SspnQ62147 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SspnQ62147 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SspnQ62147 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SspnQ62147 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC16.03■□□□□ 0.16
SspnQ62147 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SspnQ62147 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SspnQ62147 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SspnQ62147 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
SspnQ62147 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SspnQ62147 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SspnQ62147 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC16.03■□□□□ 0.16
SspnQ62147 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC16.03■□□□□ 0.16
SspnQ62147 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SspnQ62147 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.03■□□□□ 0.16
SspnQ62147 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SspnQ62147 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SspnQ62147 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SspnQ62147 AA386476-201ENSMUST00000098781 1665 ntBASIC16.02■□□□□ 0.16
SspnQ62147 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
SspnQ62147 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SspnQ62147 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
SspnQ62147 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SspnQ62147 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SspnQ62147 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SspnQ62147 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC16.02■□□□□ 0.15
SspnQ62147 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
SspnQ62147 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SspnQ62147 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SspnQ62147 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SspnQ62147 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SspnQ62147 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SspnQ62147 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SspnQ62147 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms