Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Notch3Q61982 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Notch3Q61982 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Notch3Q61982 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Notch3Q61982 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Notch3Q61982 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Notch3Q61982 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC14.71□□□□□ -0.05
Notch3Q61982 Gm4968-201ENSMUST00000071458 858 ntBASIC14.71□□□□□ -0.05
Notch3Q61982 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Notch3Q61982 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Notch3Q61982 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Notch3Q61982 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Notch3Q61982 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Notch3Q61982 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Notch3Q61982 Gm9988-201ENSMUST00000069786 435 ntBASIC14.7□□□□□ -0.06
Notch3Q61982 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Notch3Q61982 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
Notch3Q61982 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Notch3Q61982 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Notch3Q61982 Dapk1-207ENSMUST00000226059 5009 ntBASIC14.7□□□□□ -0.06
Notch3Q61982 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Notch3Q61982 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC14.7□□□□□ -0.06
Notch3Q61982 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Notch3Q61982 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Notch3Q61982 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Notch3Q61982 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC14.69□□□□□ -0.06
Notch3Q61982 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Notch3Q61982 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Notch3Q61982 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Notch3Q61982 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Notch3Q61982 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC14.69□□□□□ -0.06
Notch3Q61982 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Notch3Q61982 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC14.69□□□□□ -0.06
Notch3Q61982 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Notch3Q61982 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC14.69□□□□□ -0.06
Notch3Q61982 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Notch3Q61982 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Notch3Q61982 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Notch3Q61982 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Notch3Q61982 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Notch3Q61982 Gm13042-201ENSMUST00000119244 1955 ntBASIC14.69□□□□□ -0.06
Notch3Q61982 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Notch3Q61982 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Notch3Q61982 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Notch3Q61982 Gm10653-202ENSMUST00000139570 835 ntBASIC14.69□□□□□ -0.06
Notch3Q61982 Gm22240-201ENSMUST00000175225 82 ntBASIC14.69□□□□□ -0.06
Notch3Q61982 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Notch3Q61982 AC137127.1-201ENSMUST00000213466 1078 ntBASIC14.69□□□□□ -0.06
Notch3Q61982 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC14.69□□□□□ -0.06
Notch3Q61982 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Notch3Q61982 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Notch3Q61982 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Notch3Q61982 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Notch3Q61982 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Notch3Q61982 Gm12441-201ENSMUST00000121806 588 ntBASIC14.68□□□□□ -0.06
Notch3Q61982 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Notch3Q61982 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Notch3Q61982 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Notch3Q61982 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Notch3Q61982 Gm20634-201ENSMUST00000090779 2956 ntBASIC14.68□□□□□ -0.06
Notch3Q61982 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Notch3Q61982 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC14.67□□□□□ -0.06
Notch3Q61982 Gm7514-201ENSMUST00000209475 934 ntBASIC14.67□□□□□ -0.06
Notch3Q61982 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Notch3Q61982 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Notch3Q61982 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Notch3Q61982 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Notch3Q61982 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Notch3Q61982 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Notch3Q61982 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Notch3Q61982 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
Notch3Q61982 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Notch3Q61982 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Notch3Q61982 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Notch3Q61982 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Notch3Q61982 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Notch3Q61982 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC14.67□□□□□ -0.06
Notch3Q61982 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Notch3Q61982 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Notch3Q61982 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Notch3Q61982 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Notch3Q61982 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Notch3Q61982 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Notch3Q61982 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Notch3Q61982 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Notch3Q61982 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Notch3Q61982 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC14.66□□□□□ -0.06
Notch3Q61982 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Notch3Q61982 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Notch3Q61982 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Notch3Q61982 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Notch3Q61982 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC14.66□□□□□ -0.06
Notch3Q61982 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC14.66□□□□□ -0.06
Notch3Q61982 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Notch3Q61982 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Notch3Q61982 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Notch3Q61982 Gm42555-201ENSMUST00000199304 1039 ntBASIC14.65□□□□□ -0.06
Notch3Q61982 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Notch3Q61982 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Notch3Q61982 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms