Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ecm1Q61508 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC21.57■■□□□ 1.04
Ecm1Q61508 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
Ecm1Q61508 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ecm1Q61508 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ecm1Q61508 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ecm1Q61508 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ecm1Q61508 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC21.56■■□□□ 1.04
Ecm1Q61508 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ecm1Q61508 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
Ecm1Q61508 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC21.56■■□□□ 1.04
Ecm1Q61508 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ecm1Q61508 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC21.56■■□□□ 1.04
Ecm1Q61508 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Ecm1Q61508 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Ecm1Q61508 Gm44672-201ENSMUST00000206944 1098 ntBASIC21.55■■□□□ 1.04
Ecm1Q61508 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC21.55■■□□□ 1.04
Ecm1Q61508 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ecm1Q61508 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ecm1Q61508 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ecm1Q61508 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.55■■□□□ 1.04
Ecm1Q61508 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Ecm1Q61508 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ecm1Q61508 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Ecm1Q61508 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Ecm1Q61508 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC21.54■■□□□ 1.04
Ecm1Q61508 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Ecm1Q61508 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC21.54■■□□□ 1.04
Ecm1Q61508 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Ecm1Q61508 Rab3c-203ENSMUST00000224180 967 ntBASIC21.54■■□□□ 1.04
Ecm1Q61508 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ecm1Q61508 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ecm1Q61508 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ecm1Q61508 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.54■■□□□ 1.04
Ecm1Q61508 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ecm1Q61508 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Ecm1Q61508 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC21.53■■□□□ 1.04
Ecm1Q61508 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ecm1Q61508 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC21.53■■□□□ 1.04
Ecm1Q61508 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC21.53■■□□□ 1.04
Ecm1Q61508 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Ecm1Q61508 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
Ecm1Q61508 Gm37563-201ENSMUST00000192580 1513 ntBASIC21.53■■□□□ 1.04
Ecm1Q61508 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Ecm1Q61508 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
Ecm1Q61508 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ecm1Q61508 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.52■■□□□ 1.04
Ecm1Q61508 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ecm1Q61508 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Ecm1Q61508 Trmt13-210ENSMUST00000198454 880 ntBASIC21.52■■□□□ 1.04
Ecm1Q61508 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Ecm1Q61508 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
Ecm1Q61508 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Ecm1Q61508 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.03
Ecm1Q61508 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ecm1Q61508 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC21.51■■□□□ 1.03
Ecm1Q61508 Gm44878-201ENSMUST00000205812 1295 ntBASIC21.51■■□□□ 1.03
Ecm1Q61508 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC21.51■■□□□ 1.03
Ecm1Q61508 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ecm1Q61508 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Ecm1Q61508 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ecm1Q61508 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.51■■□□□ 1.03
Ecm1Q61508 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ecm1Q61508 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ecm1Q61508 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.5■■□□□ 1.03
Ecm1Q61508 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ecm1Q61508 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC21.5■■□□□ 1.03
Ecm1Q61508 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Ecm1Q61508 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ecm1Q61508 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
Ecm1Q61508 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ecm1Q61508 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ecm1Q61508 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC21.49■■□□□ 1.03
Ecm1Q61508 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ecm1Q61508 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ecm1Q61508 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ecm1Q61508 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ecm1Q61508 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC21.49■■□□□ 1.03
Ecm1Q61508 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ecm1Q61508 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ecm1Q61508 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ecm1Q61508 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ecm1Q61508 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Ecm1Q61508 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
Ecm1Q61508 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ecm1Q61508 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ecm1Q61508 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ecm1Q61508 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ecm1Q61508 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ecm1Q61508 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.48■■□□□ 1.03
Ecm1Q61508 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Ecm1Q61508 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ecm1Q61508 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ecm1Q61508 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ecm1Q61508 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
Ecm1Q61508 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ecm1Q61508 Gm10812-201ENSMUST00000099864 546 ntBASIC21.47■■□□□ 1.03
Ecm1Q61508 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Ecm1Q61508 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ecm1Q61508 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms