Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Gm38342-201ENSMUST00000195710 2980 ntBASIC14.98□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC14.98□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Gm43530-201ENSMUST00000195920 274 ntBASIC14.98□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC14.97□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC14.97□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Gm6627-201ENSMUST00000218299 2386 ntBASIC14.97□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.97□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 BC021767-201ENSMUST00000126387 1716 ntBASIC14.96□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Gm43566-201ENSMUST00000196851 808 ntBASIC14.96□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC14.95□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC14.95□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Gm20100-201ENSMUST00000209418 2272 ntBASIC14.95□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC14.95□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC14.95□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC14.94□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC14.94□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC14.94□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Gm45640-201ENSMUST00000210665 1896 ntBASIC14.94□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Fam105a-203ENSMUST00000226170 3043 ntBASIC14.94□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 AA386476-201ENSMUST00000098781 1665 ntBASIC14.93□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms