Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf43Q5NCP0 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf43Q5NCP0 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf43Q5NCP0 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.68■□□□□ 0.74
Rnf43Q5NCP0 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf43Q5NCP0 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Rnf43Q5NCP0 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf43Q5NCP0 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf43Q5NCP0 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf43Q5NCP0 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Rnf43Q5NCP0 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf43Q5NCP0 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf43Q5NCP0 Gm6420-201ENSMUST00000193885 723 ntBASIC19.68■□□□□ 0.74
Rnf43Q5NCP0 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf43Q5NCP0 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf43Q5NCP0 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf43Q5NCP0 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Rnf43Q5NCP0 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.68■□□□□ 0.74
Rnf43Q5NCP0 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf43Q5NCP0 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Rnf43Q5NCP0 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf43Q5NCP0 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf43Q5NCP0 Gm6211-202ENSMUST00000167849 925 ntBASIC19.67■□□□□ 0.74
Rnf43Q5NCP0 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf43Q5NCP0 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Rnf43Q5NCP0 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf43Q5NCP0 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf43Q5NCP0 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf43Q5NCP0 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Rnf43Q5NCP0 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf43Q5NCP0 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
Rnf43Q5NCP0 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf43Q5NCP0 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf43Q5NCP0 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf43Q5NCP0 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf43Q5NCP0 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Rnf43Q5NCP0 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.66■□□□□ 0.74
Rnf43Q5NCP0 Gm10252-201ENSMUST00000209541 832 ntBASIC19.66■□□□□ 0.74
Rnf43Q5NCP0 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf43Q5NCP0 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf43Q5NCP0 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf43Q5NCP0 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf43Q5NCP0 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Rnf43Q5NCP0 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.66■□□□□ 0.74
Rnf43Q5NCP0 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.65■□□□□ 0.74
Rnf43Q5NCP0 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf43Q5NCP0 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf43Q5NCP0 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf43Q5NCP0 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Rnf43Q5NCP0 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Rnf43Q5NCP0 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Rnf43Q5NCP0 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
Rnf43Q5NCP0 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf43Q5NCP0 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Rnf43Q5NCP0 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf43Q5NCP0 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf43Q5NCP0 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf43Q5NCP0 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Rnf43Q5NCP0 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf43Q5NCP0 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf43Q5NCP0 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf43Q5NCP0 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf43Q5NCP0 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf43Q5NCP0 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf43Q5NCP0 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf43Q5NCP0 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Rnf43Q5NCP0 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.63■□□□□ 0.73
Rnf43Q5NCP0 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf43Q5NCP0 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
Rnf43Q5NCP0 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Rnf43Q5NCP0 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf43Q5NCP0 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.62■□□□□ 0.73
Rnf43Q5NCP0 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.62■□□□□ 0.73
Rnf43Q5NCP0 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.62■□□□□ 0.73
Rnf43Q5NCP0 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.62■□□□□ 0.73
Rnf43Q5NCP0 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.62■□□□□ 0.73
Rnf43Q5NCP0 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf43Q5NCP0 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf43Q5NCP0 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf43Q5NCP0 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.62■□□□□ 0.73
Rnf43Q5NCP0 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf43Q5NCP0 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf43Q5NCP0 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf43Q5NCP0 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.61■□□□□ 0.73
Rnf43Q5NCP0 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf43Q5NCP0 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
Rnf43Q5NCP0 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Rnf43Q5NCP0 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.61■□□□□ 0.73
Rnf43Q5NCP0 Gm13168-201ENSMUST00000121771 632 ntBASIC19.61■□□□□ 0.73
Rnf43Q5NCP0 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.61■□□□□ 0.73
Rnf43Q5NCP0 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.61■□□□□ 0.73
Rnf43Q5NCP0 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf43Q5NCP0 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf43Q5NCP0 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf43Q5NCP0 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf43Q5NCP0 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf43Q5NCP0 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf43Q5NCP0 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf43Q5NCP0 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf43Q5NCP0 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms