Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scn2bQ56A07 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Scn2bQ56A07 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.06■□□□□ 0.64
Scn2bQ56A07 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.06■□□□□ 0.64
Scn2bQ56A07 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Scn2bQ56A07 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scn2bQ56A07 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Scn2bQ56A07 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scn2bQ56A07 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scn2bQ56A07 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scn2bQ56A07 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Scn2bQ56A07 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
Scn2bQ56A07 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scn2bQ56A07 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn2bQ56A07 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn2bQ56A07 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn2bQ56A07 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn2bQ56A07 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.04■□□□□ 0.64
Scn2bQ56A07 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Scn2bQ56A07 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn2bQ56A07 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Scn2bQ56A07 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn2bQ56A07 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn2bQ56A07 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn2bQ56A07 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn2bQ56A07 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.04■□□□□ 0.64
Scn2bQ56A07 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Scn2bQ56A07 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn2bQ56A07 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Scn2bQ56A07 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scn2bQ56A07 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scn2bQ56A07 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.03■□□□□ 0.64
Scn2bQ56A07 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scn2bQ56A07 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
Scn2bQ56A07 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scn2bQ56A07 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.03■□□□□ 0.64
Scn2bQ56A07 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.03■□□□□ 0.64
Scn2bQ56A07 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scn2bQ56A07 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Scn2bQ56A07 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scn2bQ56A07 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Scn2bQ56A07 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scn2bQ56A07 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.03■□□□□ 0.64
Scn2bQ56A07 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Scn2bQ56A07 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Scn2bQ56A07 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Scn2bQ56A07 Gm12821-201ENSMUST00000120022 600 ntBASIC19.02■□□□□ 0.64
Scn2bQ56A07 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.02■□□□□ 0.64
Scn2bQ56A07 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Scn2bQ56A07 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Scn2bQ56A07 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Scn2bQ56A07 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Scn2bQ56A07 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Scn2bQ56A07 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn2bQ56A07 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Scn2bQ56A07 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn2bQ56A07 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Scn2bQ56A07 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Scn2bQ56A07 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn2bQ56A07 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.01■□□□□ 0.63
Scn2bQ56A07 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.01■□□□□ 0.63
Scn2bQ56A07 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.01■□□□□ 0.63
Scn2bQ56A07 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn2bQ56A07 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn2bQ56A07 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.01■□□□□ 0.63
Scn2bQ56A07 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Scn2bQ56A07 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn2bQ56A07 Gm37352-201ENSMUST00000193908 2181 ntBASIC19■□□□□ 0.63
Scn2bQ56A07 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn2bQ56A07 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
Scn2bQ56A07 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn2bQ56A07 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19■□□□□ 0.63
Scn2bQ56A07 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn2bQ56A07 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19■□□□□ 0.63
Scn2bQ56A07 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Scn2bQ56A07 Gm43231-201ENSMUST00000202960 2258 ntBASIC19■□□□□ 0.63
Scn2bQ56A07 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn2bQ56A07 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn2bQ56A07 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19■□□□□ 0.63
Scn2bQ56A07 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scn2bQ56A07 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
Scn2bQ56A07 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scn2bQ56A07 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scn2bQ56A07 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Scn2bQ56A07 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Scn2bQ56A07 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.99■□□□□ 0.63
Scn2bQ56A07 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scn2bQ56A07 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.99■□□□□ 0.63
Scn2bQ56A07 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
Scn2bQ56A07 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scn2bQ56A07 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scn2bQ56A07 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scn2bQ56A07 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Scn2bQ56A07 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scn2bQ56A07 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Scn2bQ56A07 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Scn2bQ56A07 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scn2bQ56A07 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scn2bQ56A07 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scn2bQ56A07 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms