Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Herc2Q4U2R1 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC11.76□□□□□ -0.53
Herc2Q4U2R1 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC11.76□□□□□ -0.53
Herc2Q4U2R1 Gm28033-201ENSMUST00000184224 96 ntBASIC11.76□□□□□ -0.53
Herc2Q4U2R1 Gm30025-201ENSMUST00000218555 728 ntBASIC11.76□□□□□ -0.53
Herc2Q4U2R1 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Herc2Q4U2R1 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Herc2Q4U2R1 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Herc2Q4U2R1 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC11.76□□□□□ -0.53
Herc2Q4U2R1 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC11.76□□□□□ -0.53
Herc2Q4U2R1 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Herc2Q4U2R1 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Herc2Q4U2R1 AC163280.1-201ENSMUST00000228194 1100 ntBASIC11.75□□□□□ -0.53
Herc2Q4U2R1 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC11.75□□□□□ -0.53
Herc2Q4U2R1 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
Herc2Q4U2R1 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Herc2Q4U2R1 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC11.75□□□□□ -0.53
Herc2Q4U2R1 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Herc2Q4U2R1 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC11.75□□□□□ -0.53
Herc2Q4U2R1 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Herc2Q4U2R1 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Herc2Q4U2R1 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Herc2Q4U2R1 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Herc2Q4U2R1 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Herc2Q4U2R1 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Herc2Q4U2R1 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC11.74□□□□□ -0.53
Herc2Q4U2R1 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Herc2Q4U2R1 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Herc2Q4U2R1 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Herc2Q4U2R1 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC11.74□□□□□ -0.53
Herc2Q4U2R1 Gm43514-201ENSMUST00000198852 424 ntBASIC11.74□□□□□ -0.53
Herc2Q4U2R1 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Herc2Q4U2R1 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Herc2Q4U2R1 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Herc2Q4U2R1 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Herc2Q4U2R1 Gm15847-201ENSMUST00000121417 1065 ntBASIC11.74□□□□□ -0.53
Herc2Q4U2R1 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC11.74□□□□□ -0.53
Herc2Q4U2R1 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC11.74□□□□□ -0.53
Herc2Q4U2R1 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Herc2Q4U2R1 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Herc2Q4U2R1 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Herc2Q4U2R1 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Herc2Q4U2R1 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC11.74□□□□□ -0.53
Herc2Q4U2R1 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC11.74□□□□□ -0.53
Herc2Q4U2R1 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Herc2Q4U2R1 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Herc2Q4U2R1 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Herc2Q4U2R1 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Herc2Q4U2R1 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Herc2Q4U2R1 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Herc2Q4U2R1 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Herc2Q4U2R1 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Herc2Q4U2R1 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Herc2Q4U2R1 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC11.73□□□□□ -0.53
Herc2Q4U2R1 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Herc2Q4U2R1 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Herc2Q4U2R1 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Herc2Q4U2R1 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Herc2Q4U2R1 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Herc2Q4U2R1 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Herc2Q4U2R1 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Herc2Q4U2R1 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Herc2Q4U2R1 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Herc2Q4U2R1 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC11.72□□□□□ -0.53
Herc2Q4U2R1 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Herc2Q4U2R1 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Herc2Q4U2R1 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC11.72□□□□□ -0.53
Herc2Q4U2R1 Gm44549-201ENSMUST00000208351 577 ntBASIC11.72□□□□□ -0.53
Herc2Q4U2R1 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Herc2Q4U2R1 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Herc2Q4U2R1 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC11.72□□□□□ -0.53
Herc2Q4U2R1 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Herc2Q4U2R1 Gm7284-201ENSMUST00000131667 944 ntBASIC11.72□□□□□ -0.53
Herc2Q4U2R1 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Herc2Q4U2R1 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Herc2Q4U2R1 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Herc2Q4U2R1 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Herc2Q4U2R1 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Herc2Q4U2R1 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Herc2Q4U2R1 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Herc2Q4U2R1 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Herc2Q4U2R1 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC11.71□□□□□ -0.53
Herc2Q4U2R1 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Herc2Q4U2R1 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Herc2Q4U2R1 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Herc2Q4U2R1 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC11.71□□□□□ -0.53
Herc2Q4U2R1 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Herc2Q4U2R1 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Herc2Q4U2R1 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Herc2Q4U2R1 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Herc2Q4U2R1 Gm16042-201ENSMUST00000204813 1247 ntBASIC11.71□□□□□ -0.54
Herc2Q4U2R1 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Herc2Q4U2R1 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Herc2Q4U2R1 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Herc2Q4U2R1 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Herc2Q4U2R1 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Herc2Q4U2R1 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Herc2Q4U2R1 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Herc2Q4U2R1 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Herc2Q4U2R1 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms