Protein–RNA interactions for Protein: Q3V038

Ttc9, Tetratricopeptide repeat protein 9A, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc9Q3V038 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Ttc9Q3V038 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
Ttc9Q3V038 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ttc9Q3V038 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ttc9Q3V038 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ttc9Q3V038 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.65■□□□□ 0.9
Ttc9Q3V038 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ttc9Q3V038 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Ttc9Q3V038 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ttc9Q3V038 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ttc9Q3V038 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ttc9Q3V038 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ttc9Q3V038 Mir7071-201ENSMUST00000184847 69 ntBASIC20.65■□□□□ 0.9
Ttc9Q3V038 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ttc9Q3V038 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.65■□□□□ 0.9
Ttc9Q3V038 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Ttc9Q3V038 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ttc9Q3V038 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.64■□□□□ 0.9
Ttc9Q3V038 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Ttc9Q3V038 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.64■□□□□ 0.89
Ttc9Q3V038 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ttc9Q3V038 Gm20760-201ENSMUST00000179197 648 ntBASIC20.64■□□□□ 0.89
Ttc9Q3V038 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.64■□□□□ 0.89
Ttc9Q3V038 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ttc9Q3V038 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Ttc9Q3V038 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ttc9Q3V038 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ttc9Q3V038 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ttc9Q3V038 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ttc9Q3V038 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ttc9Q3V038 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ttc9Q3V038 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ttc9Q3V038 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ttc9Q3V038 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
Ttc9Q3V038 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ttc9Q3V038 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ttc9Q3V038 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.62■□□□□ 0.89
Ttc9Q3V038 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ttc9Q3V038 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ttc9Q3V038 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ttc9Q3V038 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ttc9Q3V038 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ttc9Q3V038 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ttc9Q3V038 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ttc9Q3V038 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ttc9Q3V038 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ttc9Q3V038 Gm7977-201ENSMUST00000193787 748 ntBASIC20.61■□□□□ 0.89
Ttc9Q3V038 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.61■□□□□ 0.89
Ttc9Q3V038 AC158538.1-201ENSMUST00000225870 294 ntBASIC20.61■□□□□ 0.89
Ttc9Q3V038 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ttc9Q3V038 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ttc9Q3V038 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ttc9Q3V038 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Ttc9Q3V038 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
Ttc9Q3V038 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ttc9Q3V038 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ttc9Q3V038 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ttc9Q3V038 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.6■□□□□ 0.89
Ttc9Q3V038 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Ttc9Q3V038 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ttc9Q3V038 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Ttc9Q3V038 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Ttc9Q3V038 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
Ttc9Q3V038 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Ttc9Q3V038 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ttc9Q3V038 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Ttc9Q3V038 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Ttc9Q3V038 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ttc9Q3V038 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ttc9Q3V038 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Ttc9Q3V038 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ttc9Q3V038 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
Ttc9Q3V038 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ttc9Q3V038 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.59■□□□□ 0.89
Ttc9Q3V038 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ttc9Q3V038 Notumos-201ENSMUST00000151998 2659 ntBASIC20.59■□□□□ 0.89
Ttc9Q3V038 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ttc9Q3V038 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ttc9Q3V038 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Ttc9Q3V038 Gm8520-201ENSMUST00000186517 868 ntBASIC20.58■□□□□ 0.89
Ttc9Q3V038 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Ttc9Q3V038 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ttc9Q3V038 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ttc9Q3V038 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.57■□□□□ 0.88
Ttc9Q3V038 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ttc9Q3V038 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Ttc9Q3V038 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.57■□□□□ 0.88
Ttc9Q3V038 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ttc9Q3V038 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.57■□□□□ 0.88
Ttc9Q3V038 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ttc9Q3V038 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ttc9Q3V038 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ttc9Q3V038 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Ttc9Q3V038 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.56■□□□□ 0.88
Ttc9Q3V038 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ttc9Q3V038 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ttc9Q3V038 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ttc9Q3V038 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ttc9Q3V038 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ttc9Q3V038 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms