Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.65■□□□□ 0.26
Shisa3Q3UPR0 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shisa3Q3UPR0 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Shisa3Q3UPR0 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC16.65■□□□□ 0.26
Shisa3Q3UPR0 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Shisa3Q3UPR0 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Shisa3Q3UPR0 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shisa3Q3UPR0 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shisa3Q3UPR0 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shisa3Q3UPR0 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shisa3Q3UPR0 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Shisa3Q3UPR0 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shisa3Q3UPR0 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC16.65■□□□□ 0.26
Shisa3Q3UPR0 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shisa3Q3UPR0 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Shisa3Q3UPR0 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Shisa3Q3UPR0 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Shisa3Q3UPR0 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC16.64■□□□□ 0.25
Shisa3Q3UPR0 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Shisa3Q3UPR0 Gm22238-201ENSMUST00000175222 88 ntBASIC16.64■□□□□ 0.25
Shisa3Q3UPR0 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC16.64■□□□□ 0.25
Shisa3Q3UPR0 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.64■□□□□ 0.25
Shisa3Q3UPR0 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC16.64■□□□□ 0.25
Shisa3Q3UPR0 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.64■□□□□ 0.25
Shisa3Q3UPR0 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC16.64■□□□□ 0.25
Shisa3Q3UPR0 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Shisa3Q3UPR0 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Shisa3Q3UPR0 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Shisa3Q3UPR0 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shisa3Q3UPR0 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shisa3Q3UPR0 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Shisa3Q3UPR0 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Shisa3Q3UPR0 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Shisa3Q3UPR0 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shisa3Q3UPR0 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC16.63■□□□□ 0.25
Shisa3Q3UPR0 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.63■□□□□ 0.25
Shisa3Q3UPR0 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC16.63■□□□□ 0.25
Shisa3Q3UPR0 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC16.63■□□□□ 0.25
Shisa3Q3UPR0 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Shisa3Q3UPR0 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shisa3Q3UPR0 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shisa3Q3UPR0 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Shisa3Q3UPR0 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Shisa3Q3UPR0 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shisa3Q3UPR0 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Shisa3Q3UPR0 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.63■□□□□ 0.25
Shisa3Q3UPR0 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shisa3Q3UPR0 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shisa3Q3UPR0 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Shisa3Q3UPR0 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shisa3Q3UPR0 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.62■□□□□ 0.25
Shisa3Q3UPR0 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shisa3Q3UPR0 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shisa3Q3UPR0 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shisa3Q3UPR0 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC16.62■□□□□ 0.25
Shisa3Q3UPR0 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.62■□□□□ 0.25
Shisa3Q3UPR0 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Shisa3Q3UPR0 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shisa3Q3UPR0 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shisa3Q3UPR0 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shisa3Q3UPR0 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Shisa3Q3UPR0 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shisa3Q3UPR0 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.61■□□□□ 0.25
Shisa3Q3UPR0 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Shisa3Q3UPR0 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.61■□□□□ 0.25
Shisa3Q3UPR0 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Shisa3Q3UPR0 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.61■□□□□ 0.25
Shisa3Q3UPR0 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shisa3Q3UPR0 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shisa3Q3UPR0 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shisa3Q3UPR0 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.61■□□□□ 0.25
Shisa3Q3UPR0 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shisa3Q3UPR0 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shisa3Q3UPR0 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Shisa3Q3UPR0 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Shisa3Q3UPR0 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shisa3Q3UPR0 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shisa3Q3UPR0 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shisa3Q3UPR0 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shisa3Q3UPR0 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shisa3Q3UPR0 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Shisa3Q3UPR0 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shisa3Q3UPR0 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Shisa3Q3UPR0 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shisa3Q3UPR0 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Shisa3Q3UPR0 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shisa3Q3UPR0 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shisa3Q3UPR0 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shisa3Q3UPR0 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shisa3Q3UPR0 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shisa3Q3UPR0 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Shisa3Q3UPR0 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.6■□□□□ 0.25
Shisa3Q3UPR0 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shisa3Q3UPR0 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shisa3Q3UPR0 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Shisa3Q3UPR0 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shisa3Q3UPR0 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC16.59■□□□□ 0.25
Shisa3Q3UPR0 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shisa3Q3UPR0 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Shisa3Q3UPR0 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms