Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cks1brtQ3UNC9 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cks1brtQ3UNC9 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cks1brtQ3UNC9 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC13.97□□□□□ -0.17
Cks1brtQ3UNC9 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cks1brtQ3UNC9 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Cks1brtQ3UNC9 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cks1brtQ3UNC9 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cks1brtQ3UNC9 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC13.97□□□□□ -0.17
Cks1brtQ3UNC9 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cks1brtQ3UNC9 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Cks1brtQ3UNC9 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cks1brtQ3UNC9 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cks1brtQ3UNC9 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cks1brtQ3UNC9 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cks1brtQ3UNC9 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cks1brtQ3UNC9 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC13.97□□□□□ -0.17
Cks1brtQ3UNC9 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cks1brtQ3UNC9 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cks1brtQ3UNC9 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.96□□□□□ -0.17
Cks1brtQ3UNC9 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cks1brtQ3UNC9 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC13.96□□□□□ -0.17
Cks1brtQ3UNC9 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cks1brtQ3UNC9 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cks1brtQ3UNC9 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cks1brtQ3UNC9 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Cks1brtQ3UNC9 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cks1brtQ3UNC9 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cks1brtQ3UNC9 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cks1brtQ3UNC9 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cks1brtQ3UNC9 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Cks1brtQ3UNC9 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Cks1brtQ3UNC9 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cks1brtQ3UNC9 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC13.96□□□□□ -0.18
Cks1brtQ3UNC9 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cks1brtQ3UNC9 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Cks1brtQ3UNC9 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cks1brtQ3UNC9 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cks1brtQ3UNC9 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cks1brtQ3UNC9 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cks1brtQ3UNC9 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cks1brtQ3UNC9 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cks1brtQ3UNC9 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cks1brtQ3UNC9 Gm44428-201ENSMUST00000204474 874 ntBASIC13.95□□□□□ -0.18
Cks1brtQ3UNC9 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cks1brtQ3UNC9 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cks1brtQ3UNC9 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cks1brtQ3UNC9 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cks1brtQ3UNC9 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cks1brtQ3UNC9 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cks1brtQ3UNC9 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Cks1brtQ3UNC9 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cks1brtQ3UNC9 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cks1brtQ3UNC9 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cks1brtQ3UNC9 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cks1brtQ3UNC9 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cks1brtQ3UNC9 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Cks1brtQ3UNC9 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cks1brtQ3UNC9 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cks1brtQ3UNC9 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Cks1brtQ3UNC9 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cks1brtQ3UNC9 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cks1brtQ3UNC9 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cks1brtQ3UNC9 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Cks1brtQ3UNC9 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cks1brtQ3UNC9 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Cks1brtQ3UNC9 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cks1brtQ3UNC9 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cks1brtQ3UNC9 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cks1brtQ3UNC9 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cks1brtQ3UNC9 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Cks1brtQ3UNC9 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Cks1brtQ3UNC9 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cks1brtQ3UNC9 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cks1brtQ3UNC9 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cks1brtQ3UNC9 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cks1brtQ3UNC9 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cks1brtQ3UNC9 Gm43231-201ENSMUST00000202960 2258 ntBASIC13.93□□□□□ -0.18
Cks1brtQ3UNC9 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cks1brtQ3UNC9 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cks1brtQ3UNC9 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Cks1brtQ3UNC9 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cks1brtQ3UNC9 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC13.93□□□□□ -0.18
Cks1brtQ3UNC9 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cks1brtQ3UNC9 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cks1brtQ3UNC9 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cks1brtQ3UNC9 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cks1brtQ3UNC9 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cks1brtQ3UNC9 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cks1brtQ3UNC9 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cks1brtQ3UNC9 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cks1brtQ3UNC9 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Cks1brtQ3UNC9 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Cks1brtQ3UNC9 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Cks1brtQ3UNC9 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cks1brtQ3UNC9 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cks1brtQ3UNC9 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cks1brtQ3UNC9 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cks1brtQ3UNC9 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cks1brtQ3UNC9 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms