Protein–RNA interactions for Protein: Q3UN04

Usp30, Ubiquitin carboxyl-terminal hydrolase 30, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp30Q3UN04 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.43■□□□□ 0.7
Usp30Q3UN04 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp30Q3UN04 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Usp30Q3UN04 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp30Q3UN04 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Usp30Q3UN04 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp30Q3UN04 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp30Q3UN04 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Usp30Q3UN04 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.42■□□□□ 0.7
Usp30Q3UN04 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp30Q3UN04 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Usp30Q3UN04 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp30Q3UN04 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp30Q3UN04 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp30Q3UN04 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp30Q3UN04 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Usp30Q3UN04 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.42■□□□□ 0.7
Usp30Q3UN04 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp30Q3UN04 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.41■□□□□ 0.7
Usp30Q3UN04 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Usp30Q3UN04 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Usp30Q3UN04 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.41■□□□□ 0.7
Usp30Q3UN04 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.41■□□□□ 0.7
Usp30Q3UN04 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.41■□□□□ 0.7
Usp30Q3UN04 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp30Q3UN04 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.41■□□□□ 0.7
Usp30Q3UN04 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Usp30Q3UN04 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp30Q3UN04 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp30Q3UN04 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Usp30Q3UN04 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.4■□□□□ 0.7
Usp30Q3UN04 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.4■□□□□ 0.7
Usp30Q3UN04 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.4■□□□□ 0.7
Usp30Q3UN04 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Usp30Q3UN04 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Usp30Q3UN04 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp30Q3UN04 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Usp30Q3UN04 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
Usp30Q3UN04 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
Usp30Q3UN04 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
Usp30Q3UN04 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp30Q3UN04 Gm12441-201ENSMUST00000121806 588 ntBASIC19.39■□□□□ 0.69
Usp30Q3UN04 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp30Q3UN04 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp30Q3UN04 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Usp30Q3UN04 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp30Q3UN04 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Usp30Q3UN04 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp30Q3UN04 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp30Q3UN04 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp30Q3UN04 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp30Q3UN04 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp30Q3UN04 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Usp30Q3UN04 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp30Q3UN04 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Usp30Q3UN04 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.38■□□□□ 0.69
Usp30Q3UN04 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp30Q3UN04 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Usp30Q3UN04 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp30Q3UN04 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Usp30Q3UN04 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Usp30Q3UN04 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.37■□□□□ 0.69
Usp30Q3UN04 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.37■□□□□ 0.69
Usp30Q3UN04 Gm7860-201ENSMUST00000121190 879 ntBASIC19.37■□□□□ 0.69
Usp30Q3UN04 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.37■□□□□ 0.69
Usp30Q3UN04 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Usp30Q3UN04 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Usp30Q3UN04 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp30Q3UN04 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Usp30Q3UN04 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Usp30Q3UN04 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Usp30Q3UN04 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp30Q3UN04 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp30Q3UN04 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Usp30Q3UN04 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
Usp30Q3UN04 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.36■□□□□ 0.69
Usp30Q3UN04 Gm6420-201ENSMUST00000193885 723 ntBASIC19.36■□□□□ 0.69
Usp30Q3UN04 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp30Q3UN04 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Usp30Q3UN04 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.36■□□□□ 0.69
Usp30Q3UN04 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Usp30Q3UN04 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp30Q3UN04 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.36■□□□□ 0.69
Usp30Q3UN04 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp30Q3UN04 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Usp30Q3UN04 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp30Q3UN04 Gm6365-201ENSMUST00000054711 744 ntBASIC19.35■□□□□ 0.69
Usp30Q3UN04 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp30Q3UN04 Gm4968-201ENSMUST00000071458 858 ntBASIC19.35■□□□□ 0.69
Usp30Q3UN04 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp30Q3UN04 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp30Q3UN04 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp30Q3UN04 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.35■□□□□ 0.69
Usp30Q3UN04 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.35■□□□□ 0.69
Usp30Q3UN04 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp30Q3UN04 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Usp30Q3UN04 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp30Q3UN04 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp30Q3UN04 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Usp30Q3UN04 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms