Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf44Q3UHJ8 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf44Q3UHJ8 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf44Q3UHJ8 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf44Q3UHJ8 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf44Q3UHJ8 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf44Q3UHJ8 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
Rnf44Q3UHJ8 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Rnf44Q3UHJ8 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf44Q3UHJ8 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.62■□□□□ 0.57
Rnf44Q3UHJ8 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.62■□□□□ 0.57
Rnf44Q3UHJ8 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.62■□□□□ 0.57
Rnf44Q3UHJ8 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Rnf44Q3UHJ8 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Rnf44Q3UHJ8 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf44Q3UHJ8 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf44Q3UHJ8 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf44Q3UHJ8 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf44Q3UHJ8 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf44Q3UHJ8 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf44Q3UHJ8 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf44Q3UHJ8 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf44Q3UHJ8 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf44Q3UHJ8 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf44Q3UHJ8 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf44Q3UHJ8 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
Rnf44Q3UHJ8 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf44Q3UHJ8 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Rnf44Q3UHJ8 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf44Q3UHJ8 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf44Q3UHJ8 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf44Q3UHJ8 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.6■□□□□ 0.57
Rnf44Q3UHJ8 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf44Q3UHJ8 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf44Q3UHJ8 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf44Q3UHJ8 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf44Q3UHJ8 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf44Q3UHJ8 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf44Q3UHJ8 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
Rnf44Q3UHJ8 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.6■□□□□ 0.57
Rnf44Q3UHJ8 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf44Q3UHJ8 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf44Q3UHJ8 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Rnf44Q3UHJ8 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf44Q3UHJ8 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf44Q3UHJ8 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf44Q3UHJ8 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Rnf44Q3UHJ8 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf44Q3UHJ8 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.59■□□□□ 0.57
Rnf44Q3UHJ8 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf44Q3UHJ8 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf44Q3UHJ8 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf44Q3UHJ8 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf44Q3UHJ8 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rnf44Q3UHJ8 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Rnf44Q3UHJ8 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rnf44Q3UHJ8 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
Rnf44Q3UHJ8 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Rnf44Q3UHJ8 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Rnf44Q3UHJ8 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rnf44Q3UHJ8 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.58■□□□□ 0.56
Rnf44Q3UHJ8 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.58■□□□□ 0.56
Rnf44Q3UHJ8 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rnf44Q3UHJ8 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rnf44Q3UHJ8 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rnf44Q3UHJ8 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rnf44Q3UHJ8 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.58■□□□□ 0.56
Rnf44Q3UHJ8 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf44Q3UHJ8 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
Rnf44Q3UHJ8 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Rnf44Q3UHJ8 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf44Q3UHJ8 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf44Q3UHJ8 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
Rnf44Q3UHJ8 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf44Q3UHJ8 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf44Q3UHJ8 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf44Q3UHJ8 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Rnf44Q3UHJ8 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf44Q3UHJ8 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf44Q3UHJ8 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
Rnf44Q3UHJ8 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf44Q3UHJ8 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf44Q3UHJ8 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf44Q3UHJ8 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf44Q3UHJ8 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf44Q3UHJ8 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf44Q3UHJ8 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf44Q3UHJ8 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.56■□□□□ 0.56
Rnf44Q3UHJ8 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.56■□□□□ 0.56
Rnf44Q3UHJ8 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Rnf44Q3UHJ8 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf44Q3UHJ8 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf44Q3UHJ8 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.56■□□□□ 0.56
Rnf44Q3UHJ8 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Rnf44Q3UHJ8 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.55■□□□□ 0.56
Rnf44Q3UHJ8 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf44Q3UHJ8 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Rnf44Q3UHJ8 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.55■□□□□ 0.56
Rnf44Q3UHJ8 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.55■□□□□ 0.56
Rnf44Q3UHJ8 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms