Protein–RNA interactions for Protein: Q3U2C5

Rnf149, E3 ubiquitin-protein ligase RNF149, mousemouse

Predictions only

Length 394 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf149Q3U2C5 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
Rnf149Q3U2C5 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf149Q3U2C5 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf149Q3U2C5 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Rnf149Q3U2C5 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf149Q3U2C5 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf149Q3U2C5 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf149Q3U2C5 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf149Q3U2C5 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf149Q3U2C5 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf149Q3U2C5 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf149Q3U2C5 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Rnf149Q3U2C5 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf149Q3U2C5 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf149Q3U2C5 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf149Q3U2C5 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf149Q3U2C5 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.23■□□□□ 0.35
Rnf149Q3U2C5 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf149Q3U2C5 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf149Q3U2C5 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Rnf149Q3U2C5 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf149Q3U2C5 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf149Q3U2C5 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.22■□□□□ 0.35
Rnf149Q3U2C5 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf149Q3U2C5 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.22■□□□□ 0.35
Rnf149Q3U2C5 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf149Q3U2C5 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf149Q3U2C5 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf149Q3U2C5 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf149Q3U2C5 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Rnf149Q3U2C5 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.21■□□□□ 0.35
Rnf149Q3U2C5 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.21■□□□□ 0.35
Rnf149Q3U2C5 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf149Q3U2C5 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf149Q3U2C5 Gm9847-201ENSMUST00000052528 599 ntBASIC17.21■□□□□ 0.35
Rnf149Q3U2C5 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Rnf149Q3U2C5 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf149Q3U2C5 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rnf149Q3U2C5 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rnf149Q3U2C5 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rnf149Q3U2C5 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf149Q3U2C5 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf149Q3U2C5 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf149Q3U2C5 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf149Q3U2C5 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf149Q3U2C5 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf149Q3U2C5 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.2■□□□□ 0.34
Rnf149Q3U2C5 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Rnf149Q3U2C5 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf149Q3U2C5 Gm9870-201ENSMUST00000063874 645 ntBASIC17.2■□□□□ 0.34
Rnf149Q3U2C5 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf149Q3U2C5 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf149Q3U2C5 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf149Q3U2C5 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf149Q3U2C5 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Rnf149Q3U2C5 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf149Q3U2C5 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf149Q3U2C5 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Rnf149Q3U2C5 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf149Q3U2C5 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.19■□□□□ 0.34
Rnf149Q3U2C5 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf149Q3U2C5 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf149Q3U2C5 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf149Q3U2C5 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf149Q3U2C5 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf149Q3U2C5 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf149Q3U2C5 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf149Q3U2C5 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf149Q3U2C5 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Rnf149Q3U2C5 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf149Q3U2C5 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf149Q3U2C5 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17.18■□□□□ 0.34
Rnf149Q3U2C5 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Rnf149Q3U2C5 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf149Q3U2C5 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf149Q3U2C5 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf149Q3U2C5 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Rnf149Q3U2C5 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.18■□□□□ 0.34
Rnf149Q3U2C5 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf149Q3U2C5 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf149Q3U2C5 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf149Q3U2C5 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf149Q3U2C5 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.17■□□□□ 0.34
Rnf149Q3U2C5 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.17■□□□□ 0.34
Rnf149Q3U2C5 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
Rnf149Q3U2C5 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf149Q3U2C5 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.17■□□□□ 0.34
Rnf149Q3U2C5 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf149Q3U2C5 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.17■□□□□ 0.34
Rnf149Q3U2C5 BC021767-201ENSMUST00000126387 1716 ntBASIC17.17■□□□□ 0.34
Rnf149Q3U2C5 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Rnf149Q3U2C5 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
Rnf149Q3U2C5 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf149Q3U2C5 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf149Q3U2C5 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
Rnf149Q3U2C5 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf149Q3U2C5 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.17■□□□□ 0.34
Rnf149Q3U2C5 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf149Q3U2C5 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.16■□□□□ 0.34
Rnf149Q3U2C5 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms