Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Gm12922-201ENSMUST00000120626 809 ntBASIC20.28■□□□□ 0.84
Cul4aQ3TCH7 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cul4aQ3TCH7 Rps24-207ENSMUST00000224568 714 ntBASIC20.28■□□□□ 0.84
Cul4aQ3TCH7 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cul4aQ3TCH7 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Cul4aQ3TCH7 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cul4aQ3TCH7 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cul4aQ3TCH7 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cul4aQ3TCH7 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Cul4aQ3TCH7 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cul4aQ3TCH7 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.27■□□□□ 0.84
Cul4aQ3TCH7 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cul4aQ3TCH7 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cul4aQ3TCH7 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cul4aQ3TCH7 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cul4aQ3TCH7 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cul4aQ3TCH7 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Cul4aQ3TCH7 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cul4aQ3TCH7 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cul4aQ3TCH7 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cul4aQ3TCH7 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cul4aQ3TCH7 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cul4aQ3TCH7 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cul4aQ3TCH7 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.27■□□□□ 0.83
Cul4aQ3TCH7 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cul4aQ3TCH7 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cul4aQ3TCH7 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cul4aQ3TCH7 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
Cul4aQ3TCH7 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cul4aQ3TCH7 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.26■□□□□ 0.83
Cul4aQ3TCH7 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Cul4aQ3TCH7 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Cul4aQ3TCH7 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cul4aQ3TCH7 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cul4aQ3TCH7 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cul4aQ3TCH7 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cul4aQ3TCH7 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cul4aQ3TCH7 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cul4aQ3TCH7 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cul4aQ3TCH7 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cul4aQ3TCH7 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cul4aQ3TCH7 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cul4aQ3TCH7 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cul4aQ3TCH7 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cul4aQ3TCH7 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cul4aQ3TCH7 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cul4aQ3TCH7 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.24■□□□□ 0.83
Cul4aQ3TCH7 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cul4aQ3TCH7 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cul4aQ3TCH7 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.24■□□□□ 0.83
Cul4aQ3TCH7 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.24■□□□□ 0.83
Cul4aQ3TCH7 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cul4aQ3TCH7 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cul4aQ3TCH7 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cul4aQ3TCH7 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cul4aQ3TCH7 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.23■□□□□ 0.83
Cul4aQ3TCH7 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cul4aQ3TCH7 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cul4aQ3TCH7 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cul4aQ3TCH7 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cul4aQ3TCH7 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cul4aQ3TCH7 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cul4aQ3TCH7 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cul4aQ3TCH7 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Cul4aQ3TCH7 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Cul4aQ3TCH7 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cul4aQ3TCH7 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cul4aQ3TCH7 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Cul4aQ3TCH7 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cul4aQ3TCH7 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cul4aQ3TCH7 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cul4aQ3TCH7 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cul4aQ3TCH7 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.21■□□□□ 0.83
Cul4aQ3TCH7 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cul4aQ3TCH7 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cul4aQ3TCH7 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cul4aQ3TCH7 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cul4aQ3TCH7 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
Cul4aQ3TCH7 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cul4aQ3TCH7 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cul4aQ3TCH7 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Cul4aQ3TCH7 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cul4aQ3TCH7 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cul4aQ3TCH7 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cul4aQ3TCH7 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cul4aQ3TCH7 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cul4aQ3TCH7 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cul4aQ3TCH7 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cul4aQ3TCH7 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cul4aQ3TCH7 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cul4aQ3TCH7 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cul4aQ3TCH7 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cul4aQ3TCH7 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.19■□□□□ 0.82
Cul4aQ3TCH7 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.19■□□□□ 0.82
Cul4aQ3TCH7 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.19■□□□□ 0.82
Cul4aQ3TCH7 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Cul4aQ3TCH7 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.19■□□□□ 0.82
Cul4aQ3TCH7 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.19■□□□□ 0.82
Cul4aQ3TCH7 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.19■□□□□ 0.82
Cul4aQ3TCH7 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms