Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Q3KNL4 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Q3KNL4 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Q3KNL4 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.92■□□□□ 0.62
Q3KNL4 AA386476-201ENSMUST00000098781 1665 ntBASIC18.92■□□□□ 0.62
Q3KNL4 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Q3KNL4 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Q3KNL4 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Q3KNL4 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Q3KNL4 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Q3KNL4 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Q3KNL4 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Q3KNL4 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Q3KNL4 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Q3KNL4 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Q3KNL4 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.92■□□□□ 0.62
Q3KNL4 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Q3KNL4 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Q3KNL4 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.91■□□□□ 0.62
Q3KNL4 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Q3KNL4 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Q3KNL4 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.91■□□□□ 0.62
Q3KNL4 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Q3KNL4 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.91■□□□□ 0.62
Q3KNL4 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Q3KNL4 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Q3KNL4 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Q3KNL4 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Q3KNL4 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Q3KNL4 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Q3KNL4 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Q3KNL4 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Q3KNL4 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Q3KNL4 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Q3KNL4 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Q3KNL4 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Q3KNL4 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Q3KNL4 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Q3KNL4 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Q3KNL4 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.9■□□□□ 0.62
Q3KNL4 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Q3KNL4 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Q3KNL4 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Q3KNL4 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Q3KNL4 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Q3KNL4 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.9■□□□□ 0.62
Q3KNL4 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Q3KNL4 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Q3KNL4 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Q3KNL4 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.89■□□□□ 0.61
Q3KNL4 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Q3KNL4 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Q3KNL4 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Q3KNL4 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.89■□□□□ 0.61
Q3KNL4 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Q3KNL4 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.89■□□□□ 0.61
Q3KNL4 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Q3KNL4 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Q3KNL4 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.89■□□□□ 0.61
Q3KNL4 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Q3KNL4 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Q3KNL4 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Q3KNL4 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Q3KNL4 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Q3KNL4 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Q3KNL4 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Q3KNL4 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.88■□□□□ 0.61
Q3KNL4 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Q3KNL4 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Q3KNL4 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Q3KNL4 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Q3KNL4 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Q3KNL4 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Q3KNL4 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Q3KNL4 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.88■□□□□ 0.61
Q3KNL4 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Q3KNL4 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Q3KNL4 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Q3KNL4 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.87■□□□□ 0.61
Q3KNL4 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.87■□□□□ 0.61
Q3KNL4 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Q3KNL4 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.87■□□□□ 0.61
Q3KNL4 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.87■□□□□ 0.61
Q3KNL4 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.87■□□□□ 0.61
Q3KNL4 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Q3KNL4 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Q3KNL4 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Q3KNL4 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Q3KNL4 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Q3KNL4 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Q3KNL4 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Q3KNL4 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.86■□□□□ 0.61
Q3KNL4 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Q3KNL4 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Q3KNL4 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Q3KNL4 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Q3KNL4 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Q3KNL4 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Q3KNL4 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Q3KNL4 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms