Protein–RNA interactions for Protein: P97784

Cry1, Cryptochrome-1, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cry1P97784 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cry1P97784 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cry1P97784 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cry1P97784 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.4■□□□□ 0.7
Cry1P97784 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cry1P97784 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Cry1P97784 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cry1P97784 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cry1P97784 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cry1P97784 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Cry1P97784 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cry1P97784 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cry1P97784 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cry1P97784 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cry1P97784 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cry1P97784 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cry1P97784 Nespas-201ENSMUST00000143738 1083 ntBASIC19.39■□□□□ 0.69
Cry1P97784 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cry1P97784 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.39■□□□□ 0.69
Cry1P97784 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.39■□□□□ 0.69
Cry1P97784 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.39■□□□□ 0.69
Cry1P97784 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.39■□□□□ 0.69
Cry1P97784 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Cry1P97784 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cry1P97784 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Cry1P97784 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cry1P97784 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cry1P97784 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cry1P97784 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.38■□□□□ 0.69
Cry1P97784 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.38■□□□□ 0.69
Cry1P97784 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cry1P97784 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cry1P97784 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cry1P97784 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cry1P97784 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Cry1P97784 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cry1P97784 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.37■□□□□ 0.69
Cry1P97784 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cry1P97784 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cry1P97784 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cry1P97784 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cry1P97784 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Cry1P97784 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.37■□□□□ 0.69
Cry1P97784 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
Cry1P97784 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
Cry1P97784 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Cry1P97784 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cry1P97784 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.37■□□□□ 0.69
Cry1P97784 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.37■□□□□ 0.69
Cry1P97784 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cry1P97784 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cry1P97784 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cry1P97784 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cry1P97784 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cry1P97784 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cry1P97784 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cry1P97784 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cry1P97784 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cry1P97784 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cry1P97784 Gm10653-202ENSMUST00000139570 835 ntBASIC19.36■□□□□ 0.69
Cry1P97784 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.36■□□□□ 0.69
Cry1P97784 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.36■□□□□ 0.69
Cry1P97784 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cry1P97784 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cry1P97784 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cry1P97784 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cry1P97784 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Cry1P97784 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cry1P97784 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Cry1P97784 Gm38205-201ENSMUST00000192243 258 ntBASIC19.35■□□□□ 0.69
Cry1P97784 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cry1P97784 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.35■□□□□ 0.69
Cry1P97784 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cry1P97784 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cry1P97784 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cry1P97784 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Cry1P97784 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Cry1P97784 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cry1P97784 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.34■□□□□ 0.69
Cry1P97784 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
Cry1P97784 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.34■□□□□ 0.69
Cry1P97784 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cry1P97784 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cry1P97784 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Cry1P97784 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cry1P97784 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cry1P97784 Gm7290-201ENSMUST00000104990 617 ntBASIC19.33■□□□□ 0.68
Cry1P97784 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.33■□□□□ 0.68
Cry1P97784 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Cry1P97784 Gm12918-201ENSMUST00000120234 636 ntBASIC19.33■□□□□ 0.68
Cry1P97784 Gm15710-201ENSMUST00000121821 636 ntBASIC19.33■□□□□ 0.68
Cry1P97784 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Cry1P97784 Gm5075-201ENSMUST00000196916 622 ntBASIC19.33■□□□□ 0.68
Cry1P97784 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cry1P97784 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.33■□□□□ 0.68
Cry1P97784 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.33■□□□□ 0.68
Cry1P97784 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Cry1P97784 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Cry1P97784 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cry1P97784 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms