Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Lig3P97386 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lig3P97386 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lig3P97386 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lig3P97386 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Lig3P97386 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lig3P97386 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lig3P97386 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lig3P97386 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lig3P97386 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lig3P97386 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Lig3P97386 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Lig3P97386 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lig3P97386 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lig3P97386 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lig3P97386 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.85■□□□□ 0.93
Lig3P97386 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lig3P97386 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Lig3P97386 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lig3P97386 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lig3P97386 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lig3P97386 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lig3P97386 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.84■□□□□ 0.93
Lig3P97386 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lig3P97386 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Lig3P97386 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.84■□□□□ 0.93
Lig3P97386 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lig3P97386 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Lig3P97386 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Lig3P97386 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.83■□□□□ 0.93
Lig3P97386 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.83■□□□□ 0.93
Lig3P97386 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Lig3P97386 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Lig3P97386 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Lig3P97386 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Lig3P97386 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.83■□□□□ 0.93
Lig3P97386 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
Lig3P97386 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Lig3P97386 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Lig3P97386 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Lig3P97386 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lig3P97386 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Lig3P97386 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lig3P97386 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Lig3P97386 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lig3P97386 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lig3P97386 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.81■□□□□ 0.92
Lig3P97386 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lig3P97386 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Lig3P97386 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lig3P97386 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Lig3P97386 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lig3P97386 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC20.81■□□□□ 0.92
Lig3P97386 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Lig3P97386 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.81■□□□□ 0.92
Lig3P97386 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.81■□□□□ 0.92
Lig3P97386 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Lig3P97386 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.81■□□□□ 0.92
Lig3P97386 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lig3P97386 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lig3P97386 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lig3P97386 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.8■□□□□ 0.92
Lig3P97386 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lig3P97386 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lig3P97386 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lig3P97386 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.8■□□□□ 0.92
Lig3P97386 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lig3P97386 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.8■□□□□ 0.92
Lig3P97386 Gm11421-201ENSMUST00000122124 294 ntBASIC20.8■□□□□ 0.92
Lig3P97386 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Lig3P97386 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.8■□□□□ 0.92
Lig3P97386 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lig3P97386 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lig3P97386 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lig3P97386 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lig3P97386 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Lig3P97386 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lig3P97386 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lig3P97386 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Lig3P97386 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lig3P97386 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Lig3P97386 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lig3P97386 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lig3P97386 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lig3P97386 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lig3P97386 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lig3P97386 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lig3P97386 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Lig3P97386 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lig3P97386 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.79■□□□□ 0.92
Lig3P97386 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
Lig3P97386 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lig3P97386 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lig3P97386 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lig3P97386 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lig3P97386 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lig3P97386 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lig3P97386 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.78■□□□□ 0.92
Lig3P97386 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lig3P97386 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms