Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim43cP86449 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Trim43cP86449 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Trim43cP86449 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim43cP86449 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC21.04■□□□□ 0.96
Trim43cP86449 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim43cP86449 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim43cP86449 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC21.04■□□□□ 0.96
Trim43cP86449 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC21.04■□□□□ 0.96
Trim43cP86449 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.04■□□□□ 0.96
Trim43cP86449 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim43cP86449 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim43cP86449 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim43cP86449 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim43cP86449 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim43cP86449 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim43cP86449 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC21.03■□□□□ 0.96
Trim43cP86449 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
Trim43cP86449 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC21.03■□□□□ 0.96
Trim43cP86449 Cdc34b-202ENSMUST00000188741 1252 ntBASIC21.03■□□□□ 0.96
Trim43cP86449 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim43cP86449 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC21.03■□□□□ 0.96
Trim43cP86449 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Trim43cP86449 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim43cP86449 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim43cP86449 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim43cP86449 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim43cP86449 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Trim43cP86449 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
Trim43cP86449 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC21.02■□□□□ 0.96
Trim43cP86449 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC21.02■□□□□ 0.96
Trim43cP86449 Gm40848-201ENSMUST00000221998 324 ntBASIC21.02■□□□□ 0.96
Trim43cP86449 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim43cP86449 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim43cP86449 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Trim43cP86449 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Trim43cP86449 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Trim43cP86449 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim43cP86449 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Trim43cP86449 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Trim43cP86449 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
Trim43cP86449 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim43cP86449 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim43cP86449 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim43cP86449 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim43cP86449 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Trim43cP86449 Gm21168-201ENSMUST00000199646 1096 ntBASIC21.01■□□□□ 0.95
Trim43cP86449 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim43cP86449 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Trim43cP86449 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
Trim43cP86449 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim43cP86449 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC21■□□□□ 0.95
Trim43cP86449 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Trim43cP86449 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC21■□□□□ 0.95
Trim43cP86449 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC21■□□□□ 0.95
Trim43cP86449 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
Trim43cP86449 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Trim43cP86449 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Trim43cP86449 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC21■□□□□ 0.95
Trim43cP86449 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim43cP86449 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim43cP86449 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Trim43cP86449 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim43cP86449 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Trim43cP86449 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim43cP86449 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trim43cP86449 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.99■□□□□ 0.95
Trim43cP86449 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim43cP86449 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trim43cP86449 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim43cP86449 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.99■□□□□ 0.95
Trim43cP86449 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim43cP86449 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim43cP86449 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim43cP86449 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim43cP86449 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Trim43cP86449 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim43cP86449 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim43cP86449 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.98■□□□□ 0.95
Trim43cP86449 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Trim43cP86449 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim43cP86449 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim43cP86449 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Trim43cP86449 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim43cP86449 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
Trim43cP86449 Gm27801-201ENSMUST00000184174 223 ntBASIC20.98■□□□□ 0.95
Trim43cP86449 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim43cP86449 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim43cP86449 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim43cP86449 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Trim43cP86449 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trim43cP86449 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.97■□□□□ 0.95
Trim43cP86449 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim43cP86449 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim43cP86449 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim43cP86449 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim43cP86449 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trim43cP86449 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim43cP86449 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim43cP86449 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms