Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trim43bP86448 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Trim43bP86448 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trim43bP86448 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim43bP86448 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim43bP86448 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim43bP86448 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim43bP86448 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim43bP86448 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim43bP86448 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim43bP86448 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim43bP86448 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trim43bP86448 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim43bP86448 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim43bP86448 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim43bP86448 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim43bP86448 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim43bP86448 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trim43bP86448 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.72■□□□□ 0.75
Trim43bP86448 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim43bP86448 Gm43530-201ENSMUST00000195920 274 ntBASIC19.72■□□□□ 0.75
Trim43bP86448 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.72■□□□□ 0.75
Trim43bP86448 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trim43bP86448 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trim43bP86448 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim43bP86448 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim43bP86448 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim43bP86448 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim43bP86448 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim43bP86448 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trim43bP86448 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim43bP86448 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim43bP86448 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Trim43bP86448 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.71■□□□□ 0.75
Trim43bP86448 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.71■□□□□ 0.75
Trim43bP86448 Gm45417-201ENSMUST00000209533 758 ntBASIC19.71■□□□□ 0.75
Trim43bP86448 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.71■□□□□ 0.75
Trim43bP86448 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim43bP86448 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trim43bP86448 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim43bP86448 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim43bP86448 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.71■□□□□ 0.75
Trim43bP86448 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trim43bP86448 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim43bP86448 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.7■□□□□ 0.74
Trim43bP86448 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim43bP86448 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim43bP86448 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.7■□□□□ 0.74
Trim43bP86448 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim43bP86448 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Trim43bP86448 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim43bP86448 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trim43bP86448 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim43bP86448 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
Trim43bP86448 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Trim43bP86448 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim43bP86448 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trim43bP86448 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim43bP86448 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.7■□□□□ 0.74
Trim43bP86448 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.7■□□□□ 0.74
Trim43bP86448 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.69■□□□□ 0.74
Trim43bP86448 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim43bP86448 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim43bP86448 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim43bP86448 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.69■□□□□ 0.74
Trim43bP86448 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.69■□□□□ 0.74
Trim43bP86448 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim43bP86448 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trim43bP86448 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trim43bP86448 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Trim43bP86448 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Trim43bP86448 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trim43bP86448 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim43bP86448 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim43bP86448 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.68■□□□□ 0.74
Trim43bP86448 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim43bP86448 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Trim43bP86448 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Trim43bP86448 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim43bP86448 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim43bP86448 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Trim43bP86448 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Trim43bP86448 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim43bP86448 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.67■□□□□ 0.74
Trim43bP86448 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Trim43bP86448 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim43bP86448 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim43bP86448 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.67■□□□□ 0.74
Trim43bP86448 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim43bP86448 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim43bP86448 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim43bP86448 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trim43bP86448 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Trim43bP86448 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trim43bP86448 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
Trim43bP86448 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim43bP86448 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim43bP86448 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trim43bP86448 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim43bP86448 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms