Protein–RNA interactions for Protein: P70340

Smad1, Mothers against decapentaplegic homolog 1, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad1P70340 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smad1P70340 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smad1P70340 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smad1P70340 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Smad1P70340 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Smad1P70340 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smad1P70340 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smad1P70340 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.8■□□□□ 0.76
Smad1P70340 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Smad1P70340 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.8■□□□□ 0.76
Smad1P70340 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Smad1P70340 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.79■□□□□ 0.76
Smad1P70340 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.79■□□□□ 0.76
Smad1P70340 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smad1P70340 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.79■□□□□ 0.76
Smad1P70340 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smad1P70340 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Smad1P70340 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smad1P70340 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.79■□□□□ 0.76
Smad1P70340 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.79■□□□□ 0.76
Smad1P70340 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smad1P70340 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Smad1P70340 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smad1P70340 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Smad1P70340 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Smad1P70340 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Smad1P70340 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Smad1P70340 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smad1P70340 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smad1P70340 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Smad1P70340 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.77■□□□□ 0.76
Smad1P70340 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smad1P70340 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smad1P70340 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smad1P70340 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smad1P70340 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smad1P70340 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smad1P70340 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Smad1P70340 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.77■□□□□ 0.76
Smad1P70340 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Smad1P70340 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smad1P70340 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smad1P70340 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smad1P70340 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Smad1P70340 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smad1P70340 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Smad1P70340 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.76■□□□□ 0.75
Smad1P70340 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Smad1P70340 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smad1P70340 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smad1P70340 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.76■□□□□ 0.75
Smad1P70340 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Smad1P70340 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.76■□□□□ 0.75
Smad1P70340 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smad1P70340 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Smad1P70340 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smad1P70340 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smad1P70340 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smad1P70340 Gm7291-201ENSMUST00000199147 382 ntBASIC19.75■□□□□ 0.75
Smad1P70340 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smad1P70340 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Smad1P70340 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
Smad1P70340 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Smad1P70340 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Smad1P70340 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smad1P70340 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smad1P70340 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smad1P70340 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smad1P70340 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smad1P70340 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
Smad1P70340 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Smad1P70340 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.74■□□□□ 0.75
Smad1P70340 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Smad1P70340 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Smad1P70340 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smad1P70340 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smad1P70340 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Smad1P70340 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smad1P70340 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Smad1P70340 Gm43173-201ENSMUST00000202246 593 ntBASIC19.73■□□□□ 0.75
Smad1P70340 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.73■□□□□ 0.75
Smad1P70340 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smad1P70340 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smad1P70340 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Smad1P70340 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Smad1P70340 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Smad1P70340 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smad1P70340 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smad1P70340 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.72■□□□□ 0.75
Smad1P70340 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.72■□□□□ 0.75
Smad1P70340 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.72■□□□□ 0.75
Smad1P70340 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smad1P70340 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Smad1P70340 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Smad1P70340 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Smad1P70340 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smad1P70340 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smad1P70340 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Smad1P70340 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Smad1P70340 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms