Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC13.74□□□□□ -0.21
Rpl39P62892 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC13.74□□□□□ -0.21
Rpl39P62892 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rpl39P62892 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rpl39P62892 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rpl39P62892 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rpl39P62892 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rpl39P62892 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rpl39P62892 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rpl39P62892 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Rpl39P62892 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rpl39P62892 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rpl39P62892 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rpl39P62892 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rpl39P62892 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rpl39P62892 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rpl39P62892 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rpl39P62892 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Rpl39P62892 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rpl39P62892 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rpl39P62892 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rpl39P62892 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rpl39P62892 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC13.73□□□□□ -0.21
Rpl39P62892 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Rpl39P62892 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rpl39P62892 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Rpl39P62892 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Rpl39P62892 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rpl39P62892 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rpl39P62892 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rpl39P62892 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rpl39P62892 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rpl39P62892 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rpl39P62892 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rpl39P62892 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rpl39P62892 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rpl39P62892 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rpl39P62892 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Rpl39P62892 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rpl39P62892 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rpl39P62892 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC13.72□□□□□ -0.21
Rpl39P62892 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC13.72□□□□□ -0.21
Rpl39P62892 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Rpl39P62892 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rpl39P62892 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rpl39P62892 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rpl39P62892 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC13.72□□□□□ -0.21
Rpl39P62892 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
Rpl39P62892 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Rpl39P62892 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Rpl39P62892 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC13.72□□□□□ -0.21
Rpl39P62892 Gm6627-201ENSMUST00000218299 2386 ntBASIC13.72□□□□□ -0.21
Rpl39P62892 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rpl39P62892 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rpl39P62892 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rpl39P62892 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC13.71□□□□□ -0.21
Rpl39P62892 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rpl39P62892 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Rpl39P62892 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rpl39P62892 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.21
Rpl39P62892 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rpl39P62892 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rpl39P62892 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rpl39P62892 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rpl39P62892 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC13.71□□□□□ -0.21
Rpl39P62892 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC13.71□□□□□ -0.21
Rpl39P62892 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rpl39P62892 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Rpl39P62892 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Rpl39P62892 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rpl39P62892 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rpl39P62892 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rpl39P62892 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rpl39P62892 Rncr4-201ENSMUST00000194541 2234 ntBASIC13.7□□□□□ -0.22
Rpl39P62892 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rpl39P62892 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rpl39P62892 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rpl39P62892 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rpl39P62892 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rpl39P62892 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC13.7□□□□□ -0.22
Rpl39P62892 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rpl39P62892 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC13.7□□□□□ -0.22
Rpl39P62892 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rpl39P62892 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Rpl39P62892 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC13.7□□□□□ -0.22
Rpl39P62892 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rpl39P62892 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rpl39P62892 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Rpl39P62892 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rpl39P62892 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC13.7□□□□□ -0.22
Rpl39P62892 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Rpl39P62892 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rpl39P62892 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rpl39P62892 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC13.7□□□□□ -0.22
Rpl39P62892 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rpl39P62892 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC13.7□□□□□ -0.22
Rpl39P62892 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpl39P62892 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rpl39P62892 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpl39P62892 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms