Protein–RNA interactions for Protein: P56857

Cldn18, Claudin-18, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn18P56857 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldn18P56857 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cldn18P56857 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cldn18P56857 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cldn18P56857 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cldn18P56857 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cldn18P56857 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.31■□□□□ 0.36
Cldn18P56857 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.31■□□□□ 0.36
Cldn18P56857 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.31■□□□□ 0.36
Cldn18P56857 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Cldn18P56857 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cldn18P56857 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cldn18P56857 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cldn18P56857 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cldn18P56857 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.3■□□□□ 0.36
Cldn18P56857 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cldn18P56857 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cldn18P56857 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cldn18P56857 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cldn18P56857 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.3■□□□□ 0.36
Cldn18P56857 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cldn18P56857 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cldn18P56857 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn18P56857 Golph3-202ENSMUST00000226517 2359 ntBASIC17.29■□□□□ 0.36
Cldn18P56857 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.29■□□□□ 0.36
Cldn18P56857 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.29■□□□□ 0.36
Cldn18P56857 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn18P56857 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn18P56857 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Cldn18P56857 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn18P56857 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn18P56857 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn18P56857 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn18P56857 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn18P56857 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn18P56857 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Cldn18P56857 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.28■□□□□ 0.36
Cldn18P56857 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.28■□□□□ 0.36
Cldn18P56857 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn18P56857 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Cldn18P56857 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn18P56857 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.28■□□□□ 0.36
Cldn18P56857 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn18P56857 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn18P56857 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
Cldn18P56857 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cldn18P56857 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cldn18P56857 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cldn18P56857 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cldn18P56857 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cldn18P56857 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Cldn18P56857 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.27■□□□□ 0.36
Cldn18P56857 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cldn18P56857 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.27■□□□□ 0.36
Cldn18P56857 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.27■□□□□ 0.36
Cldn18P56857 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cldn18P56857 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cldn18P56857 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cldn18P56857 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cldn18P56857 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn18P56857 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn18P56857 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn18P56857 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.26■□□□□ 0.35
Cldn18P56857 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.26■□□□□ 0.35
Cldn18P56857 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.26■□□□□ 0.35
Cldn18P56857 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn18P56857 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn18P56857 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.26■□□□□ 0.35
Cldn18P56857 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
Cldn18P56857 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn18P56857 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn18P56857 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.25■□□□□ 0.35
Cldn18P56857 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn18P56857 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn18P56857 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn18P56857 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Cldn18P56857 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn18P56857 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
Cldn18P56857 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn18P56857 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.25■□□□□ 0.35
Cldn18P56857 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.25■□□□□ 0.35
Cldn18P56857 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn18P56857 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn18P56857 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Cldn18P56857 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Cldn18P56857 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn18P56857 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn18P56857 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn18P56857 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn18P56857 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn18P56857 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn18P56857 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Cldn18P56857 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Cldn18P56857 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.24■□□□□ 0.35
Cldn18P56857 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Cldn18P56857 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn18P56857 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn18P56857 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn18P56857 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Cldn18P56857 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms