Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdh11P55288 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Cdh11P55288 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdh11P55288 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdh11P55288 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdh11P55288 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdh11P55288 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdh11P55288 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cdh11P55288 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Cdh11P55288 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdh11P55288 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cdh11P55288 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdh11P55288 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.49■□□□□ 0.39
Cdh11P55288 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.49■□□□□ 0.39
Cdh11P55288 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdh11P55288 Serp2-204ENSMUST00000228055 705 ntBASIC17.49■□□□□ 0.39
Cdh11P55288 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdh11P55288 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cdh11P55288 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdh11P55288 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdh11P55288 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Cdh11P55288 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdh11P55288 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cdh11P55288 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdh11P55288 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdh11P55288 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
Cdh11P55288 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cdh11P55288 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.48■□□□□ 0.39
Cdh11P55288 Gm43137-201ENSMUST00000198052 594 ntBASIC17.48■□□□□ 0.39
Cdh11P55288 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdh11P55288 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cdh11P55288 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Cdh11P55288 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdh11P55288 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdh11P55288 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdh11P55288 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdh11P55288 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cdh11P55288 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdh11P55288 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Cdh11P55288 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdh11P55288 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdh11P55288 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cdh11P55288 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdh11P55288 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cdh11P55288 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.46■□□□□ 0.39
Cdh11P55288 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdh11P55288 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Cdh11P55288 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Cdh11P55288 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cdh11P55288 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdh11P55288 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Cdh11P55288 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.46■□□□□ 0.39
Cdh11P55288 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.46■□□□□ 0.39
Cdh11P55288 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdh11P55288 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.46■□□□□ 0.39
Cdh11P55288 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdh11P55288 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Cdh11P55288 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Cdh11P55288 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cdh11P55288 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdh11P55288 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdh11P55288 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
Cdh11P55288 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdh11P55288 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cdh11P55288 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cdh11P55288 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Cdh11P55288 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.44■□□□□ 0.38
Cdh11P55288 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdh11P55288 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdh11P55288 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdh11P55288 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Cdh11P55288 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdh11P55288 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.44■□□□□ 0.38
Cdh11P55288 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdh11P55288 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Cdh11P55288 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Cdh11P55288 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdh11P55288 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Cdh11P55288 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.44■□□□□ 0.38
Cdh11P55288 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdh11P55288 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.44■□□□□ 0.38
Cdh11P55288 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Cdh11P55288 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdh11P55288 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdh11P55288 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Cdh11P55288 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Cdh11P55288 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cdh11P55288 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdh11P55288 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdh11P55288 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdh11P55288 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdh11P55288 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdh11P55288 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Cdh11P55288 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cdh11P55288 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cdh11P55288 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdh11P55288 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Cdh11P55288 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
Cdh11P55288 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
Cdh11P55288 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms