Protein–RNA interactions for Protein: P54869

Hmgcs2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, mousemouse

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs2P54869 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Hmgcs2P54869 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Hmgcs2P54869 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
Hmgcs2P54869 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Hmgcs2P54869 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Hmgcs2P54869 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Hmgcs2P54869 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Hmgcs2P54869 Gm13168-201ENSMUST00000121771 632 ntBASIC21.6■■□□□ 1.05
Hmgcs2P54869 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC21.6■■□□□ 1.05
Hmgcs2P54869 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Hmgcs2P54869 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Hmgcs2P54869 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.6■■□□□ 1.05
Hmgcs2P54869 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Hmgcs2P54869 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
Hmgcs2P54869 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Hmgcs2P54869 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Hmgcs2P54869 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.59■■□□□ 1.05
Hmgcs2P54869 AC135637.1-201ENSMUST00000227750 365 ntBASIC21.59■■□□□ 1.05
Hmgcs2P54869 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Hmgcs2P54869 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Hmgcs2P54869 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Hmgcs2P54869 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Hmgcs2P54869 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Hmgcs2P54869 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Hmgcs2P54869 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Hmgcs2P54869 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.05
Hmgcs2P54869 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC21.58■■□□□ 1.05
Hmgcs2P54869 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC21.58■■□□□ 1.05
Hmgcs2P54869 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Hmgcs2P54869 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC21.58■■□□□ 1.05
Hmgcs2P54869 Gm37856-201ENSMUST00000191634 999 ntBASIC21.58■■□□□ 1.05
Hmgcs2P54869 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Hmgcs2P54869 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.58■■□□□ 1.04
Hmgcs2P54869 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC21.57■■□□□ 1.04
Hmgcs2P54869 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Hmgcs2P54869 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Hmgcs2P54869 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Hmgcs2P54869 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Hmgcs2P54869 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC21.57■■□□□ 1.04
Hmgcs2P54869 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC21.57■■□□□ 1.04
Hmgcs2P54869 Gm10252-201ENSMUST00000209541 832 ntBASIC21.57■■□□□ 1.04
Hmgcs2P54869 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Hmgcs2P54869 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Hmgcs2P54869 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Hmgcs2P54869 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Hmgcs2P54869 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Hmgcs2P54869 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC21.56■■□□□ 1.04
Hmgcs2P54869 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC21.56■■□□□ 1.04
Hmgcs2P54869 Gm44672-201ENSMUST00000206944 1098 ntBASIC21.56■■□□□ 1.04
Hmgcs2P54869 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Hmgcs2P54869 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Hmgcs2P54869 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Hmgcs2P54869 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Hmgcs2P54869 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC21.55■■□□□ 1.04
Hmgcs2P54869 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Hmgcs2P54869 AC131586.2-201ENSMUST00000228370 1512 ntBASIC21.55■■□□□ 1.04
Hmgcs2P54869 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Hmgcs2P54869 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.55■■□□□ 1.04
Hmgcs2P54869 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
Hmgcs2P54869 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC21.55■■□□□ 1.04
Hmgcs2P54869 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
Hmgcs2P54869 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Hmgcs2P54869 Gm26524-201ENSMUST00000192339 390 ntBASIC21.55■■□□□ 1.04
Hmgcs2P54869 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC21.55■■□□□ 1.04
Hmgcs2P54869 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC21.55■■□□□ 1.04
Hmgcs2P54869 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Hmgcs2P54869 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Hmgcs2P54869 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Hmgcs2P54869 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Hmgcs2P54869 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Hmgcs2P54869 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Hmgcs2P54869 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.54■■□□□ 1.04
Hmgcs2P54869 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Hmgcs2P54869 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Hmgcs2P54869 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Hmgcs2P54869 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Hmgcs2P54869 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Hmgcs2P54869 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Hmgcs2P54869 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Hmgcs2P54869 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.53■■□□□ 1.04
Hmgcs2P54869 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Hmgcs2P54869 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC21.53■■□□□ 1.04
Hmgcs2P54869 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Hmgcs2P54869 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Hmgcs2P54869 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Hmgcs2P54869 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Hmgcs2P54869 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Hmgcs2P54869 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC21.53■■□□□ 1.04
Hmgcs2P54869 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Hmgcs2P54869 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Hmgcs2P54869 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Hmgcs2P54869 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Hmgcs2P54869 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Hmgcs2P54869 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC21.53■■□□□ 1.04
Hmgcs2P54869 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Hmgcs2P54869 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC21.52■■□□□ 1.04
Hmgcs2P54869 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Hmgcs2P54869 Gm27032-201ENSMUST00000183124 1116 ntBASIC21.52■■□□□ 1.04
Hmgcs2P54869 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
Hmgcs2P54869 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms