Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC24.73■■□□□ 1.55
Msh6P54276 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Msh6P54276 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC24.73■■□□□ 1.55
Msh6P54276 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Msh6P54276 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC24.72■■□□□ 1.55
Msh6P54276 Gm20049-201ENSMUST00000219950 730 ntBASIC24.72■■□□□ 1.55
Msh6P54276 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Msh6P54276 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
Msh6P54276 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
Msh6P54276 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
Msh6P54276 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Msh6P54276 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
Msh6P54276 Gm38205-201ENSMUST00000192243 258 ntBASIC24.71■■□□□ 1.55
Msh6P54276 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Msh6P54276 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC24.71■■□□□ 1.55
Msh6P54276 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
Msh6P54276 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC24.71■■□□□ 1.55
Msh6P54276 Gm10655-201ENSMUST00000098658 1397 ntBASIC24.7■■□□□ 1.55
Msh6P54276 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC24.7■■□□□ 1.55
Msh6P54276 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.55
Msh6P54276 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC24.7■■□□□ 1.55
Msh6P54276 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC24.7■■□□□ 1.55
Msh6P54276 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC24.7■■□□□ 1.55
Msh6P54276 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC24.7■■□□□ 1.55
Msh6P54276 Gm5408-201ENSMUST00000197998 747 ntBASIC24.7■■□□□ 1.55
Msh6P54276 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
Msh6P54276 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC24.7■■□□□ 1.55
Msh6P54276 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
Msh6P54276 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC24.7■■□□□ 1.54
Msh6P54276 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC24.7■■□□□ 1.54
Msh6P54276 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Msh6P54276 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Msh6P54276 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Msh6P54276 Gm13534-201ENSMUST00000121169 513 ntBASIC24.69■■□□□ 1.54
Msh6P54276 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Msh6P54276 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
Msh6P54276 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC24.69■■□□□ 1.54
Msh6P54276 Gm6365-201ENSMUST00000054711 744 ntBASIC24.69■■□□□ 1.54
Msh6P54276 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Msh6P54276 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
Msh6P54276 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC24.69■■□□□ 1.54
Msh6P54276 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
Msh6P54276 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Msh6P54276 Gm20100-201ENSMUST00000209418 2272 ntBASIC24.68■■□□□ 1.54
Msh6P54276 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
Msh6P54276 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Msh6P54276 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
Msh6P54276 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Msh6P54276 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
Msh6P54276 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Msh6P54276 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Msh6P54276 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Msh6P54276 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
Msh6P54276 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Msh6P54276 Gm6211-202ENSMUST00000167849 925 ntBASIC24.67■■□□□ 1.54
Msh6P54276 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC24.67■■□□□ 1.54
Msh6P54276 Gm6420-201ENSMUST00000193885 723 ntBASIC24.67■■□□□ 1.54
Msh6P54276 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
Msh6P54276 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Msh6P54276 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
Msh6P54276 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC24.66■■□□□ 1.54
Msh6P54276 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Msh6P54276 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
Msh6P54276 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Msh6P54276 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Msh6P54276 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Msh6P54276 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
Msh6P54276 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Msh6P54276 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC24.66■■□□□ 1.54
Msh6P54276 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC24.66■■□□□ 1.54
Msh6P54276 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Msh6P54276 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Msh6P54276 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Msh6P54276 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Msh6P54276 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Msh6P54276 Gm13168-201ENSMUST00000121771 632 ntBASIC24.65■■□□□ 1.54
Msh6P54276 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Msh6P54276 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Msh6P54276 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Msh6P54276 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC24.64■■□□□ 1.53
Msh6P54276 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.53
Msh6P54276 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
Msh6P54276 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Msh6P54276 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
Msh6P54276 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC24.63■■□□□ 1.53
Msh6P54276 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Msh6P54276 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Msh6P54276 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Msh6P54276 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Msh6P54276 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Msh6P54276 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC24.63■■□□□ 1.53
Msh6P54276 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Msh6P54276 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Msh6P54276 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Msh6P54276 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
Msh6P54276 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC24.62■■□□□ 1.53
Msh6P54276 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Msh6P54276 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Msh6P54276 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Msh6P54276 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms