Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Atxn1P54254 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Atxn1P54254 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Atxn1P54254 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Atxn1P54254 Gm7290-201ENSMUST00000104990 617 ntBASIC19.11■□□□□ 0.65
Atxn1P54254 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Atxn1P54254 Gm12918-201ENSMUST00000120234 636 ntBASIC19.11■□□□□ 0.65
Atxn1P54254 Gm15710-201ENSMUST00000121821 636 ntBASIC19.11■□□□□ 0.65
Atxn1P54254 Gm5075-201ENSMUST00000196916 622 ntBASIC19.11■□□□□ 0.65
Atxn1P54254 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.11■□□□□ 0.65
Atxn1P54254 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Atxn1P54254 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Atxn1P54254 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.11■□□□□ 0.65
Atxn1P54254 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.11■□□□□ 0.65
Atxn1P54254 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Atxn1P54254 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Atxn1P54254 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Atxn1P54254 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Atxn1P54254 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Atxn1P54254 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Atxn1P54254 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Atxn1P54254 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Atxn1P54254 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Atxn1P54254 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Atxn1P54254 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Atxn1P54254 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.1■□□□□ 0.65
Atxn1P54254 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.1■□□□□ 0.65
Atxn1P54254 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Atxn1P54254 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Atxn1P54254 Gm6365-201ENSMUST00000054711 744 ntBASIC19.1■□□□□ 0.65
Atxn1P54254 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Atxn1P54254 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
Atxn1P54254 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Atxn1P54254 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Atxn1P54254 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Atxn1P54254 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Atxn1P54254 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Atxn1P54254 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Atxn1P54254 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.09■□□□□ 0.65
Atxn1P54254 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Atxn1P54254 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Atxn1P54254 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Atxn1P54254 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Atxn1P54254 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Atxn1P54254 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Atxn1P54254 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Atxn1P54254 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Atxn1P54254 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Atxn1P54254 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.08■□□□□ 0.64
Atxn1P54254 Trmt13-210ENSMUST00000198454 880 ntBASIC19.08■□□□□ 0.64
Atxn1P54254 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.08■□□□□ 0.64
Atxn1P54254 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Atxn1P54254 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Atxn1P54254 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.08■□□□□ 0.64
Atxn1P54254 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Atxn1P54254 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Atxn1P54254 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.08■□□□□ 0.64
Atxn1P54254 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Atxn1P54254 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Atxn1P54254 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Atxn1P54254 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
Atxn1P54254 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.07■□□□□ 0.64
Atxn1P54254 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Atxn1P54254 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.07■□□□□ 0.64
Atxn1P54254 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Atxn1P54254 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Atxn1P54254 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Atxn1P54254 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Atxn1P54254 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Atxn1P54254 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.07■□□□□ 0.64
Atxn1P54254 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Atxn1P54254 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.06■□□□□ 0.64
Atxn1P54254 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Atxn1P54254 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Atxn1P54254 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Atxn1P54254 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.06■□□□□ 0.64
Atxn1P54254 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Atxn1P54254 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.06■□□□□ 0.64
Atxn1P54254 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Atxn1P54254 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Atxn1P54254 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Atxn1P54254 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Atxn1P54254 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Atxn1P54254 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.05■□□□□ 0.64
Atxn1P54254 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Atxn1P54254 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Atxn1P54254 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Atxn1P54254 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Atxn1P54254 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Atxn1P54254 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Atxn1P54254 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Atxn1P54254 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Atxn1P54254 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Atxn1P54254 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Atxn1P54254 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Atxn1P54254 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Atxn1P54254 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Atxn1P54254 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Atxn1P54254 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Atxn1P54254 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms