Protein–RNA interactions for Protein: P52019

Sqle, Squalene monooxygenase, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SqleP52019 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SqleP52019 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SqleP52019 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SqleP52019 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SqleP52019 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SqleP52019 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
SqleP52019 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
SqleP52019 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
SqleP52019 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SqleP52019 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SqleP52019 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SqleP52019 Gm10698-201ENSMUST00000182663 604 ntBASIC21.09■□□□□ 0.97
SqleP52019 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC21.09■□□□□ 0.97
SqleP52019 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SqleP52019 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SqleP52019 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SqleP52019 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SqleP52019 Nrn1-203ENSMUST00000223611 1443 ntBASIC21.09■□□□□ 0.97
SqleP52019 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SqleP52019 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SqleP52019 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SqleP52019 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SqleP52019 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SqleP52019 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SqleP52019 Gm15378-201ENSMUST00000121894 207 ntBASIC21.08■□□□□ 0.97
SqleP52019 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC21.08■□□□□ 0.97
SqleP52019 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SqleP52019 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC21.08■□□□□ 0.97
SqleP52019 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SqleP52019 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SqleP52019 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SqleP52019 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
SqleP52019 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SqleP52019 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SqleP52019 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
SqleP52019 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SqleP52019 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SqleP52019 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SqleP52019 AC154266.1-201ENSMUST00000223190 503 ntBASIC21.07■□□□□ 0.96
SqleP52019 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
SqleP52019 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SqleP52019 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SqleP52019 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
SqleP52019 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.06■□□□□ 0.96
SqleP52019 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SqleP52019 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
SqleP52019 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SqleP52019 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC21.06■□□□□ 0.96
SqleP52019 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SqleP52019 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
SqleP52019 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC21.06■□□□□ 0.96
SqleP52019 AC153881.2-201ENSMUST00000214877 204 ntBASIC21.06■□□□□ 0.96
SqleP52019 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SqleP52019 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SqleP52019 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SqleP52019 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SqleP52019 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SqleP52019 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
SqleP52019 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SqleP52019 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SqleP52019 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
SqleP52019 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC21.05■□□□□ 0.96
SqleP52019 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SqleP52019 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
SqleP52019 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SqleP52019 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SqleP52019 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SqleP52019 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SqleP52019 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SqleP52019 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SqleP52019 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SqleP52019 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SqleP52019 Gm21596-201ENSMUST00000178049 1316 ntBASIC21.04■□□□□ 0.96
SqleP52019 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
SqleP52019 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SqleP52019 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
SqleP52019 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SqleP52019 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SqleP52019 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
SqleP52019 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SqleP52019 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SqleP52019 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SqleP52019 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SqleP52019 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SqleP52019 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SqleP52019 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
SqleP52019 Gm11249-201ENSMUST00000117071 859 ntBASIC21.03■□□□□ 0.96
SqleP52019 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SqleP52019 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC21.03■□□□□ 0.96
SqleP52019 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SqleP52019 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SqleP52019 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
SqleP52019 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SqleP52019 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
SqleP52019 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC21.02■□□□□ 0.96
SqleP52019 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SqleP52019 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC21.02■□□□□ 0.96
SqleP52019 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
SqleP52019 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC21.02■□□□□ 0.96
SqleP52019 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms