Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nkx2-6P43688 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Nkx2-6P43688 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nkx2-6P43688 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nkx2-6P43688 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nkx2-6P43688 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nkx2-6P43688 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Nkx2-6P43688 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.24■□□□□ 0.51
Nkx2-6P43688 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nkx2-6P43688 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Nkx2-6P43688 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
Nkx2-6P43688 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nkx2-6P43688 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nkx2-6P43688 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nkx2-6P43688 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nkx2-6P43688 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nkx2-6P43688 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.23■□□□□ 0.51
Nkx2-6P43688 Gm27011-201ENSMUST00000182352 972 ntBASIC18.23■□□□□ 0.51
Nkx2-6P43688 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.23■□□□□ 0.51
Nkx2-6P43688 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.23■□□□□ 0.51
Nkx2-6P43688 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nkx2-6P43688 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Nkx2-6P43688 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nkx2-6P43688 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Nkx2-6P43688 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Nkx2-6P43688 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nkx2-6P43688 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nkx2-6P43688 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nkx2-6P43688 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.22■□□□□ 0.51
Nkx2-6P43688 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Nkx2-6P43688 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.22■□□□□ 0.51
Nkx2-6P43688 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nkx2-6P43688 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.22■□□□□ 0.51
Nkx2-6P43688 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Nkx2-6P43688 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.22■□□□□ 0.51
Nkx2-6P43688 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.22■□□□□ 0.51
Nkx2-6P43688 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nkx2-6P43688 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nkx2-6P43688 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nkx2-6P43688 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nkx2-6P43688 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nkx2-6P43688 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nkx2-6P43688 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.21■□□□□ 0.51
Nkx2-6P43688 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.21■□□□□ 0.51
Nkx2-6P43688 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.21■□□□□ 0.51
Nkx2-6P43688 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Nkx2-6P43688 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Nkx2-6P43688 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.21■□□□□ 0.51
Nkx2-6P43688 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.21■□□□□ 0.51
Nkx2-6P43688 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.21■□□□□ 0.51
Nkx2-6P43688 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nkx2-6P43688 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nkx2-6P43688 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nkx2-6P43688 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nkx2-6P43688 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nkx2-6P43688 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Nkx2-6P43688 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nkx2-6P43688 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.2■□□□□ 0.5
Nkx2-6P43688 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nkx2-6P43688 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Nkx2-6P43688 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Nkx2-6P43688 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nkx2-6P43688 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Nkx2-6P43688 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.19■□□□□ 0.5
Nkx2-6P43688 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nkx2-6P43688 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nkx2-6P43688 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nkx2-6P43688 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nkx2-6P43688 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nkx2-6P43688 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nkx2-6P43688 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nkx2-6P43688 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nkx2-6P43688 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nkx2-6P43688 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nkx2-6P43688 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Nkx2-6P43688 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.18■□□□□ 0.5
Nkx2-6P43688 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Nkx2-6P43688 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nkx2-6P43688 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.18■□□□□ 0.5
Nkx2-6P43688 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nkx2-6P43688 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nkx2-6P43688 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nkx2-6P43688 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nkx2-6P43688 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nkx2-6P43688 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nkx2-6P43688 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nkx2-6P43688 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Nkx2-6P43688 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx2-6P43688 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Nkx2-6P43688 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx2-6P43688 Gm7290-201ENSMUST00000104990 617 ntBASIC18.17■□□□□ 0.5
Nkx2-6P43688 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Nkx2-6P43688 Gm12918-201ENSMUST00000120234 636 ntBASIC18.17■□□□□ 0.5
Nkx2-6P43688 Gm15710-201ENSMUST00000121821 636 ntBASIC18.17■□□□□ 0.5
Nkx2-6P43688 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Nkx2-6P43688 Mir5133-201ENSMUST00000174955 77 ntBASIC18.17■□□□□ 0.5
Nkx2-6P43688 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.17■□□□□ 0.5
Nkx2-6P43688 Gm5075-201ENSMUST00000196916 622 ntBASIC18.17■□□□□ 0.5
Nkx2-6P43688 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.17■□□□□ 0.5
Nkx2-6P43688 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms