Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Msh2P43247 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.82■□□□□ 0.76
Msh2P43247 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.82■□□□□ 0.76
Msh2P43247 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Msh2P43247 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Msh2P43247 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Msh2P43247 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Msh2P43247 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.81■□□□□ 0.76
Msh2P43247 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Msh2P43247 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Msh2P43247 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Msh2P43247 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Msh2P43247 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Msh2P43247 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Msh2P43247 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Msh2P43247 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Msh2P43247 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.8■□□□□ 0.76
Msh2P43247 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Msh2P43247 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Msh2P43247 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Msh2P43247 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Msh2P43247 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.8■□□□□ 0.76
Msh2P43247 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Msh2P43247 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Msh2P43247 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Msh2P43247 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Msh2P43247 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Msh2P43247 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Msh2P43247 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Msh2P43247 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Msh2P43247 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Msh2P43247 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Msh2P43247 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Msh2P43247 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
Msh2P43247 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Msh2P43247 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Msh2P43247 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Msh2P43247 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Msh2P43247 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Msh2P43247 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.78■□□□□ 0.76
Msh2P43247 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Msh2P43247 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Msh2P43247 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Msh2P43247 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
Msh2P43247 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Msh2P43247 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Msh2P43247 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Msh2P43247 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
Msh2P43247 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Msh2P43247 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Msh2P43247 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Msh2P43247 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Msh2P43247 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Msh2P43247 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Msh2P43247 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.77■□□□□ 0.76
Msh2P43247 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
Msh2P43247 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.77■□□□□ 0.76
Msh2P43247 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Msh2P43247 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Msh2P43247 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Msh2P43247 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Msh2P43247 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Msh2P43247 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Msh2P43247 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Msh2P43247 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.76■□□□□ 0.75
Msh2P43247 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Msh2P43247 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Msh2P43247 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Msh2P43247 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.76■□□□□ 0.75
Msh2P43247 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Msh2P43247 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Msh2P43247 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Msh2P43247 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Msh2P43247 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Msh2P43247 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Msh2P43247 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Msh2P43247 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.75■□□□□ 0.75
Msh2P43247 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Msh2P43247 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Msh2P43247 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Msh2P43247 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.75■□□□□ 0.75
Msh2P43247 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Msh2P43247 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Msh2P43247 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Msh2P43247 BC021767-201ENSMUST00000126387 1716 ntBASIC19.75■□□□□ 0.75
Msh2P43247 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Msh2P43247 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Msh2P43247 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Msh2P43247 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.75■□□□□ 0.75
Msh2P43247 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Msh2P43247 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Msh2P43247 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Msh2P43247 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Msh2P43247 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Msh2P43247 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Msh2P43247 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.74■□□□□ 0.75
Msh2P43247 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Msh2P43247 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Msh2P43247 Rarb-207ENSMUST00000225921 2756 ntBASIC19.74■□□□□ 0.75
Msh2P43247 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms