Protein–RNA interactions for Protein: P43028

Gdf6, Growth/differentiation factor 6, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gdf6P43028 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gdf6P43028 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gdf6P43028 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gdf6P43028 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.36■□□□□ 0.85
Gdf6P43028 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gdf6P43028 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.36■□□□□ 0.85
Gdf6P43028 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Gdf6P43028 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gdf6P43028 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Gdf6P43028 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gdf6P43028 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gdf6P43028 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.35■□□□□ 0.85
Gdf6P43028 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Gdf6P43028 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Gdf6P43028 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gdf6P43028 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Gdf6P43028 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Gdf6P43028 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Gdf6P43028 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Gdf6P43028 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gdf6P43028 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Gdf6P43028 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gdf6P43028 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gdf6P43028 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gdf6P43028 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
Gdf6P43028 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gdf6P43028 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Gdf6P43028 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Gdf6P43028 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gdf6P43028 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gdf6P43028 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gdf6P43028 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gdf6P43028 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gdf6P43028 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Gdf6P43028 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gdf6P43028 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gdf6P43028 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.33■□□□□ 0.85
Gdf6P43028 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
Gdf6P43028 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.33■□□□□ 0.84
Gdf6P43028 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.84
Gdf6P43028 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Gdf6P43028 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Gdf6P43028 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gdf6P43028 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gdf6P43028 Gm13534-201ENSMUST00000121169 513 ntBASIC20.32■□□□□ 0.84
Gdf6P43028 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.32■□□□□ 0.84
Gdf6P43028 Gm6420-201ENSMUST00000193885 723 ntBASIC20.32■□□□□ 0.84
Gdf6P43028 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.32■□□□□ 0.84
Gdf6P43028 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gdf6P43028 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Gdf6P43028 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gdf6P43028 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Gdf6P43028 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gdf6P43028 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Gdf6P43028 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gdf6P43028 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gdf6P43028 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
Gdf6P43028 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gdf6P43028 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gdf6P43028 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Gdf6P43028 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gdf6P43028 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Gdf6P43028 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.31■□□□□ 0.84
Gdf6P43028 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Gdf6P43028 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gdf6P43028 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gdf6P43028 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gdf6P43028 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gdf6P43028 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gdf6P43028 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gdf6P43028 Nespas-201ENSMUST00000143738 1083 ntBASIC20.3■□□□□ 0.84
Gdf6P43028 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gdf6P43028 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.3■□□□□ 0.84
Gdf6P43028 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Gdf6P43028 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gdf6P43028 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Gdf6P43028 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gdf6P43028 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.29■□□□□ 0.84
Gdf6P43028 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gdf6P43028 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.29■□□□□ 0.84
Gdf6P43028 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gdf6P43028 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gdf6P43028 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Gdf6P43028 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gdf6P43028 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
Gdf6P43028 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Gdf6P43028 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Gdf6P43028 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Gdf6P43028 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.28■□□□□ 0.84
Gdf6P43028 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Gdf6P43028 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gdf6P43028 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Gdf6P43028 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gdf6P43028 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Gdf6P43028 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Gdf6P43028 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.27■□□□□ 0.84
Gdf6P43028 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.27■□□□□ 0.84
Gdf6P43028 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gdf6P43028 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gdf6P43028 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms