Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
Nkx2-2P42586 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx2-2P42586 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
Nkx2-2P42586 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Nkx2-2P42586 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nkx2-2P42586 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Nkx2-2P42586 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nkx2-2P42586 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nkx2-2P42586 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nkx2-2P42586 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Nkx2-2P42586 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nkx2-2P42586 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.72■□□□□ 0.43
Nkx2-2P42586 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nkx2-2P42586 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nkx2-2P42586 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
Nkx2-2P42586 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Nkx2-2P42586 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nkx2-2P42586 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nkx2-2P42586 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Nkx2-2P42586 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.71■□□□□ 0.43
Nkx2-2P42586 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.71■□□□□ 0.43
Nkx2-2P42586 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nkx2-2P42586 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nkx2-2P42586 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nkx2-2P42586 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nkx2-2P42586 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Nkx2-2P42586 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Nkx2-2P42586 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.71■□□□□ 0.42
Nkx2-2P42586 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nkx2-2P42586 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nkx2-2P42586 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Nkx2-2P42586 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nkx2-2P42586 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Nkx2-2P42586 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nkx2-2P42586 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nkx2-2P42586 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nkx2-2P42586 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nkx2-2P42586 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Nkx2-2P42586 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nkx2-2P42586 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Nkx2-2P42586 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx2-2P42586 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.69■□□□□ 0.42
Nkx2-2P42586 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx2-2P42586 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx2-2P42586 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx2-2P42586 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx2-2P42586 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.69■□□□□ 0.42
Nkx2-2P42586 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Nkx2-2P42586 Gm43060-201ENSMUST00000200621 289 ntBASIC17.69■□□□□ 0.42
Nkx2-2P42586 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx2-2P42586 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.69■□□□□ 0.42
Nkx2-2P42586 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx2-2P42586 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx2-2P42586 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx2-2P42586 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Nkx2-2P42586 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx2-2P42586 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx2-2P42586 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx2-2P42586 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Nkx2-2P42586 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx2-2P42586 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Nkx2-2P42586 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx2-2P42586 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx2-2P42586 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx2-2P42586 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx2-2P42586 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx2-2P42586 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx2-2P42586 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx2-2P42586 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx2-2P42586 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.67■□□□□ 0.42
Nkx2-2P42586 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx2-2P42586 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx2-2P42586 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx2-2P42586 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx2-2P42586 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Nkx2-2P42586 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nkx2-2P42586 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.66■□□□□ 0.42
Nkx2-2P42586 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Nkx2-2P42586 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nkx2-2P42586 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nkx2-2P42586 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Nkx2-2P42586 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nkx2-2P42586 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
Nkx2-2P42586 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.66■□□□□ 0.42
Nkx2-2P42586 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Nkx2-2P42586 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.66■□□□□ 0.42
Nkx2-2P42586 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nkx2-2P42586 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nkx2-2P42586 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.66■□□□□ 0.42
Nkx2-2P42586 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Nkx2-2P42586 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nkx2-2P42586 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Nkx2-2P42586 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.66■□□□□ 0.42
Nkx2-2P42586 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.66■□□□□ 0.42
Nkx2-2P42586 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Nkx2-2P42586 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.66■□□□□ 0.42
Nkx2-2P42586 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nkx2-2P42586 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Nkx2-2P42586 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Nkx2-2P42586 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms