Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RetP35546 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RetP35546 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.04■□□□□ 0.48
RetP35546 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RetP35546 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
RetP35546 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
RetP35546 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
RetP35546 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RetP35546 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
RetP35546 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RetP35546 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RetP35546 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RetP35546 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.03■□□□□ 0.48
RetP35546 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RetP35546 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RetP35546 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
RetP35546 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RetP35546 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RetP35546 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RetP35546 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.02■□□□□ 0.48
RetP35546 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
RetP35546 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.02■□□□□ 0.48
RetP35546 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.02■□□□□ 0.48
RetP35546 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RetP35546 Smad6-203ENSMUST00000179458 273 ntBASIC18.02■□□□□ 0.48
RetP35546 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RetP35546 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RetP35546 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
RetP35546 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RetP35546 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.01■□□□□ 0.47
RetP35546 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RetP35546 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.01■□□□□ 0.47
RetP35546 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.01■□□□□ 0.47
RetP35546 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RetP35546 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RetP35546 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RetP35546 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RetP35546 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.01■□□□□ 0.47
RetP35546 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.01■□□□□ 0.47
RetP35546 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RetP35546 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.01■□□□□ 0.47
RetP35546 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18■□□□□ 0.47
RetP35546 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18■□□□□ 0.47
RetP35546 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18■□□□□ 0.47
RetP35546 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18■□□□□ 0.47
RetP35546 AV356131-201ENSMUST00000206201 750 ntBASIC18■□□□□ 0.47
RetP35546 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RetP35546 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18■□□□□ 0.47
RetP35546 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18■□□□□ 0.47
RetP35546 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18■□□□□ 0.47
RetP35546 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18■□□□□ 0.47
RetP35546 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.99■□□□□ 0.47
RetP35546 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RetP35546 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
RetP35546 Gm42778-201ENSMUST00000199644 553 ntBASIC17.99■□□□□ 0.47
RetP35546 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RetP35546 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RetP35546 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.99■□□□□ 0.47
RetP35546 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RetP35546 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RetP35546 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RetP35546 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
RetP35546 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RetP35546 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RetP35546 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
RetP35546 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RetP35546 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
RetP35546 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
RetP35546 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RetP35546 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RetP35546 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.98■□□□□ 0.47
RetP35546 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RetP35546 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
RetP35546 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RetP35546 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RetP35546 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RetP35546 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
RetP35546 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RetP35546 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RetP35546 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RetP35546 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RetP35546 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RetP35546 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RetP35546 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.96■□□□□ 0.47
RetP35546 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RetP35546 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RetP35546 Gm10033-202ENSMUST00000211874 928 ntBASIC17.96■□□□□ 0.47
RetP35546 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RetP35546 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.96■□□□□ 0.47
RetP35546 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RetP35546 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
RetP35546 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RetP35546 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.96■□□□□ 0.47
RetP35546 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RetP35546 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
RetP35546 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.46
RetP35546 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RetP35546 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RetP35546 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
RetP35546 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms