Protein–RNA interactions for Protein: P28235

Gja4, Gap junction alpha-4 protein, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gja4P28235 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gja4P28235 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Gja4P28235 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
Gja4P28235 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.38■□□□□ 0.69
Gja4P28235 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.38■□□□□ 0.69
Gja4P28235 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.38■□□□□ 0.69
Gja4P28235 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Gja4P28235 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gja4P28235 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.38■□□□□ 0.69
Gja4P28235 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gja4P28235 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gja4P28235 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gja4P28235 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gja4P28235 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Gja4P28235 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gja4P28235 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Gja4P28235 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gja4P28235 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.37■□□□□ 0.69
Gja4P28235 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Gja4P28235 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gja4P28235 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gja4P28235 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.37■□□□□ 0.69
Gja4P28235 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gja4P28235 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gja4P28235 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gja4P28235 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gja4P28235 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Gja4P28235 Gm22240-201ENSMUST00000175225 82 ntBASIC19.36■□□□□ 0.69
Gja4P28235 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Gja4P28235 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gja4P28235 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gja4P28235 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gja4P28235 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Gja4P28235 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Gja4P28235 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gja4P28235 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Gja4P28235 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Gja4P28235 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.35■□□□□ 0.69
Gja4P28235 Gm20049-201ENSMUST00000219950 730 ntBASIC19.35■□□□□ 0.69
Gja4P28235 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gja4P28235 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gja4P28235 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
Gja4P28235 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Gja4P28235 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gja4P28235 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gja4P28235 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gja4P28235 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.34■□□□□ 0.69
Gja4P28235 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.34■□□□□ 0.69
Gja4P28235 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gja4P28235 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Gja4P28235 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gja4P28235 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.34■□□□□ 0.69
Gja4P28235 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gja4P28235 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gja4P28235 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gja4P28235 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gja4P28235 Gm8520-201ENSMUST00000186517 868 ntBASIC19.33■□□□□ 0.68
Gja4P28235 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.33■□□□□ 0.68
Gja4P28235 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Gja4P28235 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Gja4P28235 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Gja4P28235 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gja4P28235 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.33■□□□□ 0.68
Gja4P28235 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gja4P28235 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gja4P28235 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Gja4P28235 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gja4P28235 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Gja4P28235 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Gja4P28235 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gja4P28235 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Gja4P28235 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.32■□□□□ 0.68
Gja4P28235 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Gja4P28235 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gja4P28235 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Gja4P28235 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gja4P28235 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.32■□□□□ 0.68
Gja4P28235 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Gja4P28235 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gja4P28235 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gja4P28235 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Gja4P28235 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Gja4P28235 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gja4P28235 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.31■□□□□ 0.68
Gja4P28235 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Gja4P28235 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gja4P28235 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.3■□□□□ 0.68
Gja4P28235 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gja4P28235 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gja4P28235 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gja4P28235 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
Gja4P28235 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.3■□□□□ 0.68
Gja4P28235 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.3■□□□□ 0.68
Gja4P28235 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Gja4P28235 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
Gja4P28235 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gja4P28235 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.3■□□□□ 0.68
Gja4P28235 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Gja4P28235 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gja4P28235 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms