Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cd40P27512 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cd40P27512 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cd40P27512 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Cd40P27512 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.48■□□□□ 0.39
Cd40P27512 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
Cd40P27512 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cd40P27512 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cd40P27512 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cd40P27512 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cd40P27512 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cd40P27512 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cd40P27512 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cd40P27512 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd40P27512 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Cd40P27512 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.47■□□□□ 0.39
Cd40P27512 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.47■□□□□ 0.39
Cd40P27512 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.47■□□□□ 0.39
Cd40P27512 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd40P27512 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.47■□□□□ 0.39
Cd40P27512 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.47■□□□□ 0.39
Cd40P27512 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd40P27512 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd40P27512 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.47■□□□□ 0.39
Cd40P27512 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd40P27512 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd40P27512 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.47■□□□□ 0.39
Cd40P27512 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cd40P27512 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Cd40P27512 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
Cd40P27512 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd40P27512 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd40P27512 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd40P27512 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd40P27512 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd40P27512 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cd40P27512 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd40P27512 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd40P27512 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Cd40P27512 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Cd40P27512 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Cd40P27512 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cd40P27512 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.45■□□□□ 0.38
Cd40P27512 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cd40P27512 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cd40P27512 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cd40P27512 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cd40P27512 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.45■□□□□ 0.38
Cd40P27512 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cd40P27512 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Cd40P27512 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.45■□□□□ 0.38
Cd40P27512 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cd40P27512 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cd40P27512 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cd40P27512 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cd40P27512 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cd40P27512 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.44■□□□□ 0.38
Cd40P27512 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Cd40P27512 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cd40P27512 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Cd40P27512 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cd40P27512 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Cd40P27512 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.44■□□□□ 0.38
Cd40P27512 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Cd40P27512 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cd40P27512 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cd40P27512 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cd40P27512 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Cd40P27512 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cd40P27512 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cd40P27512 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cd40P27512 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Cd40P27512 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Cd40P27512 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Cd40P27512 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cd40P27512 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cd40P27512 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Cd40P27512 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cd40P27512 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.43■□□□□ 0.38
Cd40P27512 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cd40P27512 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Cd40P27512 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cd40P27512 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cd40P27512 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Cd40P27512 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cd40P27512 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cd40P27512 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cd40P27512 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cd40P27512 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cd40P27512 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.41■□□□□ 0.38
Cd40P27512 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cd40P27512 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cd40P27512 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cd40P27512 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cd40P27512 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cd40P27512 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cd40P27512 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
Cd40P27512 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Cd40P27512 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cd40P27512 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms