Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nfkb1P25799 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nfkb1P25799 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
Nfkb1P25799 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nfkb1P25799 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nfkb1P25799 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Nfkb1P25799 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nfkb1P25799 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nfkb1P25799 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Nfkb1P25799 Gm38205-201ENSMUST00000192243 258 ntBASIC19.83■□□□□ 0.77
Nfkb1P25799 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Nfkb1P25799 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Nfkb1P25799 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nfkb1P25799 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Nfkb1P25799 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Nfkb1P25799 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nfkb1P25799 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nfkb1P25799 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Nfkb1P25799 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Nfkb1P25799 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Nfkb1P25799 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nfkb1P25799 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nfkb1P25799 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nfkb1P25799 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nfkb1P25799 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.81■□□□□ 0.76
Nfkb1P25799 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nfkb1P25799 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nfkb1P25799 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nfkb1P25799 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nfkb1P25799 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Nfkb1P25799 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nfkb1P25799 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.81■□□□□ 0.76
Nfkb1P25799 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Nfkb1P25799 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.81■□□□□ 0.76
Nfkb1P25799 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nfkb1P25799 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nfkb1P25799 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Nfkb1P25799 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nfkb1P25799 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nfkb1P25799 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nfkb1P25799 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nfkb1P25799 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nfkb1P25799 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
Nfkb1P25799 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Nfkb1P25799 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nfkb1P25799 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nfkb1P25799 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Nfkb1P25799 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Nfkb1P25799 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nfkb1P25799 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Nfkb1P25799 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nfkb1P25799 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.78■□□□□ 0.76
Nfkb1P25799 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.78■□□□□ 0.76
Nfkb1P25799 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nfkb1P25799 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Nfkb1P25799 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.78■□□□□ 0.76
Nfkb1P25799 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.78■□□□□ 0.76
Nfkb1P25799 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nfkb1P25799 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nfkb1P25799 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nfkb1P25799 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nfkb1P25799 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nfkb1P25799 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nfkb1P25799 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nfkb1P25799 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
Nfkb1P25799 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nfkb1P25799 Gm13146-201ENSMUST00000118508 780 ntBASIC19.77■□□□□ 0.76
Nfkb1P25799 Gm10602-201ENSMUST00000098239 609 ntBASIC19.77■□□□□ 0.76
Nfkb1P25799 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Nfkb1P25799 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Nfkb1P25799 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Nfkb1P25799 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nfkb1P25799 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Nfkb1P25799 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Nfkb1P25799 Gm12933-201ENSMUST00000120203 872 ntBASIC19.76■□□□□ 0.75
Nfkb1P25799 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.76■□□□□ 0.75
Nfkb1P25799 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.76■□□□□ 0.75
Nfkb1P25799 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.76■□□□□ 0.75
Nfkb1P25799 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nfkb1P25799 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Nfkb1P25799 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nfkb1P25799 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Nfkb1P25799 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nfkb1P25799 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nfkb1P25799 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Nfkb1P25799 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nfkb1P25799 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nfkb1P25799 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nfkb1P25799 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nfkb1P25799 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nfkb1P25799 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.75■□□□□ 0.75
Nfkb1P25799 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nfkb1P25799 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.75■□□□□ 0.75
Nfkb1P25799 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
Nfkb1P25799 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nfkb1P25799 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nfkb1P25799 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Nfkb1P25799 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Nfkb1P25799 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nfkb1P25799 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms