Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
Ccl1P10146 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Ccl1P10146 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccl1P10146 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
Ccl1P10146 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccl1P10146 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccl1P10146 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccl1P10146 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccl1P10146 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccl1P10146 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ccl1P10146 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccl1P10146 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Ccl1P10146 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccl1P10146 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ccl1P10146 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Ccl1P10146 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccl1P10146 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccl1P10146 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.98□□□□□ -0.01
Ccl1P10146 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ccl1P10146 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Ccl1P10146 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccl1P10146 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccl1P10146 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccl1P10146 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccl1P10146 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccl1P10146 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccl1P10146 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Ccl1P10146 Gm14523-201ENSMUST00000117260 558 ntBASIC14.97□□□□□ -0.01
Ccl1P10146 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC14.97□□□□□ -0.01
Ccl1P10146 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccl1P10146 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccl1P10146 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Ccl1P10146 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccl1P10146 Gm6627-201ENSMUST00000218299 2386 ntBASIC14.97□□□□□ -0.01
Ccl1P10146 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccl1P10146 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccl1P10146 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccl1P10146 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ccl1P10146 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
Ccl1P10146 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccl1P10146 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
Ccl1P10146 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccl1P10146 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ccl1P10146 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ccl1P10146 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccl1P10146 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ccl1P10146 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC14.96□□□□□ -0.01
Ccl1P10146 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccl1P10146 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ccl1P10146 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccl1P10146 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccl1P10146 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ccl1P10146 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.96□□□□□ -0.01
Ccl1P10146 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Ccl1P10146 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC14.96□□□□□ -0.02
Ccl1P10146 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Ccl1P10146 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ccl1P10146 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ccl1P10146 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ccl1P10146 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccl1P10146 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccl1P10146 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccl1P10146 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccl1P10146 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Ccl1P10146 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccl1P10146 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccl1P10146 Gm10620-201ENSMUST00000098379 1332 ntBASIC14.94□□□□□ -0.02
Ccl1P10146 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccl1P10146 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccl1P10146 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccl1P10146 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccl1P10146 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ccl1P10146 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccl1P10146 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ccl1P10146 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccl1P10146 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC14.94□□□□□ -0.02
Ccl1P10146 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccl1P10146 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ccl1P10146 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccl1P10146 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccl1P10146 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccl1P10146 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccl1P10146 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccl1P10146 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ccl1P10146 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Ccl1P10146 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccl1P10146 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccl1P10146 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Ccl1P10146 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC14.93□□□□□ -0.02
Ccl1P10146 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ccl1P10146 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Ccl1P10146 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC14.93□□□□□ -0.02
Ccl1P10146 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccl1P10146 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccl1P10146 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccl1P10146 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccl1P10146 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccl1P10146 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccl1P10146 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
Ccl1P10146 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms