Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rc3h2P0C090 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rc3h2P0C090 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rc3h2P0C090 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Rc3h2P0C090 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
Rc3h2P0C090 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rc3h2P0C090 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.74
Rc3h2P0C090 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rc3h2P0C090 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Rc3h2P0C090 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Rc3h2P0C090 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.64■□□□□ 0.73
Rc3h2P0C090 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rc3h2P0C090 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Rc3h2P0C090 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rc3h2P0C090 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rc3h2P0C090 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rc3h2P0C090 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.63■□□□□ 0.73
Rc3h2P0C090 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rc3h2P0C090 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Rc3h2P0C090 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.63■□□□□ 0.73
Rc3h2P0C090 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rc3h2P0C090 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rc3h2P0C090 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Rc3h2P0C090 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Rc3h2P0C090 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rc3h2P0C090 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rc3h2P0C090 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rc3h2P0C090 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Rc3h2P0C090 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rc3h2P0C090 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rc3h2P0C090 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Rc3h2P0C090 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.62■□□□□ 0.73
Rc3h2P0C090 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rc3h2P0C090 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
Rc3h2P0C090 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rc3h2P0C090 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.62■□□□□ 0.73
Rc3h2P0C090 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rc3h2P0C090 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rc3h2P0C090 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Rc3h2P0C090 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rc3h2P0C090 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rc3h2P0C090 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rc3h2P0C090 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Rc3h2P0C090 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rc3h2P0C090 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rc3h2P0C090 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rc3h2P0C090 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rc3h2P0C090 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.61■□□□□ 0.73
Rc3h2P0C090 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.61■□□□□ 0.73
Rc3h2P0C090 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.61■□□□□ 0.73
Rc3h2P0C090 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rc3h2P0C090 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rc3h2P0C090 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rc3h2P0C090 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rc3h2P0C090 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rc3h2P0C090 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rc3h2P0C090 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rc3h2P0C090 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rc3h2P0C090 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Rc3h2P0C090 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.6■□□□□ 0.73
Rc3h2P0C090 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rc3h2P0C090 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rc3h2P0C090 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rc3h2P0C090 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.59■□□□□ 0.73
Rc3h2P0C090 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rc3h2P0C090 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rc3h2P0C090 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rc3h2P0C090 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rc3h2P0C090 Gm13534-201ENSMUST00000121169 513 ntBASIC19.59■□□□□ 0.73
Rc3h2P0C090 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Rc3h2P0C090 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rc3h2P0C090 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.59■□□□□ 0.73
Rc3h2P0C090 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.59■□□□□ 0.73
Rc3h2P0C090 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rc3h2P0C090 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rc3h2P0C090 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rc3h2P0C090 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rc3h2P0C090 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rc3h2P0C090 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rc3h2P0C090 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.73
Rc3h2P0C090 Mir5133-201ENSMUST00000174955 77 ntBASIC19.58■□□□□ 0.72
Rc3h2P0C090 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.58■□□□□ 0.72
Rc3h2P0C090 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
Rc3h2P0C090 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.58■□□□□ 0.72
Rc3h2P0C090 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.58■□□□□ 0.72
Rc3h2P0C090 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rc3h2P0C090 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rc3h2P0C090 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Rc3h2P0C090 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
Rc3h2P0C090 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rc3h2P0C090 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rc3h2P0C090 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rc3h2P0C090 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rc3h2P0C090 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Rc3h2P0C090 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rc3h2P0C090 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rc3h2P0C090 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rc3h2P0C090 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rc3h2P0C090 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.56■□□□□ 0.72
Rc3h2P0C090 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms