Protein–RNA interactions for Protein: P09092

Hoxa6, Homeobox protein Hox-A6, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa6P09092 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hoxa6P09092 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hoxa6P09092 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Hoxa6P09092 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Hoxa6P09092 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.55■□□□□ 0.24
Hoxa6P09092 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hoxa6P09092 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Hoxa6P09092 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.55■□□□□ 0.24
Hoxa6P09092 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hoxa6P09092 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hoxa6P09092 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Hoxa6P09092 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Hoxa6P09092 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.55■□□□□ 0.24
Hoxa6P09092 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.55■□□□□ 0.24
Hoxa6P09092 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Hoxa6P09092 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hoxa6P09092 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hoxa6P09092 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Hoxa6P09092 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hoxa6P09092 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Hoxa6P09092 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hoxa6P09092 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.54■□□□□ 0.24
Hoxa6P09092 Gm29257-201ENSMUST00000186115 639 ntBASIC16.54■□□□□ 0.24
Hoxa6P09092 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hoxa6P09092 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hoxa6P09092 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Hoxa6P09092 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.54■□□□□ 0.24
Hoxa6P09092 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Hoxa6P09092 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Hoxa6P09092 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Hoxa6P09092 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC16.53■□□□□ 0.24
Hoxa6P09092 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.53■□□□□ 0.24
Hoxa6P09092 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hoxa6P09092 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hoxa6P09092 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Hoxa6P09092 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Hoxa6P09092 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hoxa6P09092 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16.52■□□□□ 0.24
Hoxa6P09092 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hoxa6P09092 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hoxa6P09092 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hoxa6P09092 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hoxa6P09092 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hoxa6P09092 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Hoxa6P09092 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hoxa6P09092 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hoxa6P09092 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.52■□□□□ 0.24
Hoxa6P09092 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hoxa6P09092 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hoxa6P09092 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hoxa6P09092 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Hoxa6P09092 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hoxa6P09092 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hoxa6P09092 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hoxa6P09092 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hoxa6P09092 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hoxa6P09092 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hoxa6P09092 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hoxa6P09092 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hoxa6P09092 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Hoxa6P09092 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC16.51■□□□□ 0.23
Hoxa6P09092 Gm7514-201ENSMUST00000209475 934 ntBASIC16.51■□□□□ 0.23
Hoxa6P09092 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Hoxa6P09092 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hoxa6P09092 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hoxa6P09092 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hoxa6P09092 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hoxa6P09092 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Hoxa6P09092 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hoxa6P09092 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hoxa6P09092 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hoxa6P09092 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hoxa6P09092 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Hoxa6P09092 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.5■□□□□ 0.23
Hoxa6P09092 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
Hoxa6P09092 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Hoxa6P09092 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC16.5■□□□□ 0.23
Hoxa6P09092 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Hoxa6P09092 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Hoxa6P09092 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Hoxa6P09092 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hoxa6P09092 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Hoxa6P09092 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Hoxa6P09092 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hoxa6P09092 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.49■□□□□ 0.23
Hoxa6P09092 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Hoxa6P09092 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hoxa6P09092 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Hoxa6P09092 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hoxa6P09092 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hoxa6P09092 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hoxa6P09092 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hoxa6P09092 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Hoxa6P09092 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Hoxa6P09092 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC16.49■□□□□ 0.23
Hoxa6P09092 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Hoxa6P09092 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Hoxa6P09092 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Hoxa6P09092 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.49■□□□□ 0.23
Hoxa6P09092 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms