Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Sod1P08228 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Sod1P08228 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.3■□□□□ 0.52
Sod1P08228 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Sod1P08228 Gm37856-201ENSMUST00000191634 999 ntBASIC18.3■□□□□ 0.52
Sod1P08228 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sod1P08228 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.3■□□□□ 0.52
Sod1P08228 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sod1P08228 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sod1P08228 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sod1P08228 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sod1P08228 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sod1P08228 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.29■□□□□ 0.52
Sod1P08228 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.29■□□□□ 0.52
Sod1P08228 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.29■□□□□ 0.52
Sod1P08228 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Sod1P08228 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.29■□□□□ 0.52
Sod1P08228 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sod1P08228 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Sod1P08228 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sod1P08228 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sod1P08228 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sod1P08228 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.28■□□□□ 0.52
Sod1P08228 Gm13168-201ENSMUST00000121771 632 ntBASIC18.28■□□□□ 0.52
Sod1P08228 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sod1P08228 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sod1P08228 Rab3c-203ENSMUST00000224180 967 ntBASIC18.28■□□□□ 0.52
Sod1P08228 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sod1P08228 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sod1P08228 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Sod1P08228 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Sod1P08228 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sod1P08228 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sod1P08228 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sod1P08228 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sod1P08228 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.28■□□□□ 0.52
Sod1P08228 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.28■□□□□ 0.52
Sod1P08228 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sod1P08228 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Sod1P08228 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
Sod1P08228 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.27■□□□□ 0.52
Sod1P08228 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sod1P08228 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.27■□□□□ 0.52
Sod1P08228 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sod1P08228 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sod1P08228 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.27■□□□□ 0.51
Sod1P08228 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sod1P08228 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Sod1P08228 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sod1P08228 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sod1P08228 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.26■□□□□ 0.51
Sod1P08228 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.26■□□□□ 0.51
Sod1P08228 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sod1P08228 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sod1P08228 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Sod1P08228 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Sod1P08228 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Sod1P08228 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Sod1P08228 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sod1P08228 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sod1P08228 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sod1P08228 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Sod1P08228 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sod1P08228 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.25■□□□□ 0.51
Sod1P08228 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.25■□□□□ 0.51
Sod1P08228 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.25■□□□□ 0.51
Sod1P08228 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sod1P08228 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sod1P08228 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.25■□□□□ 0.51
Sod1P08228 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.24■□□□□ 0.51
Sod1P08228 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Sod1P08228 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.24■□□□□ 0.51
Sod1P08228 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sod1P08228 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Sod1P08228 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Sod1P08228 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sod1P08228 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sod1P08228 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Sod1P08228 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sod1P08228 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sod1P08228 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Sod1P08228 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Sod1P08228 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sod1P08228 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sod1P08228 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Sod1P08228 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sod1P08228 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sod1P08228 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Sod1P08228 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.23■□□□□ 0.51
Sod1P08228 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sod1P08228 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sod1P08228 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sod1P08228 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sod1P08228 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.23■□□□□ 0.51
Sod1P08228 Trmt13-210ENSMUST00000198454 880 ntBASIC18.23■□□□□ 0.51
Sod1P08228 Gm10252-201ENSMUST00000209541 832 ntBASIC18.23■□□□□ 0.51
Sod1P08228 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
Sod1P08228 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sod1P08228 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sod1P08228 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms