Protein–RNA interactions for Protein: P06336

Ig epsilon chain C region, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06336 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
P06336 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
P06336 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
P06336 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
P06336 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
P06336 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
P06336 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
P06336 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
P06336 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
P06336 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
P06336 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.79■□□□□ 0.44
P06336 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
P06336 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
P06336 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
P06336 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
P06336 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
P06336 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
P06336 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
P06336 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
P06336 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
P06336 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
P06336 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
P06336 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
P06336 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
P06336 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
P06336 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.77■□□□□ 0.44
P06336 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
P06336 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
P06336 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
P06336 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.77■□□□□ 0.44
P06336 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
P06336 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
P06336 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
P06336 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
P06336 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
P06336 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
P06336 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
P06336 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
P06336 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
P06336 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
P06336 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.76■□□□□ 0.43
P06336 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.76■□□□□ 0.43
P06336 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
P06336 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
P06336 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
P06336 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
P06336 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
P06336 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
P06336 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
P06336 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
P06336 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
P06336 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
P06336 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
P06336 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
P06336 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
P06336 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
P06336 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
P06336 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.75■□□□□ 0.43
P06336 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
P06336 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
P06336 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
P06336 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
P06336 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
P06336 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
P06336 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
P06336 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
P06336 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
P06336 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.74■□□□□ 0.43
P06336 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.74■□□□□ 0.43
P06336 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
P06336 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
P06336 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
P06336 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.74■□□□□ 0.43
P06336 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
P06336 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
P06336 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
P06336 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
P06336 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
P06336 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
P06336 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
P06336 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.73■□□□□ 0.43
P06336 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
P06336 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
P06336 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
P06336 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.73■□□□□ 0.43
P06336 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.73■□□□□ 0.43
P06336 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.73■□□□□ 0.43
P06336 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
P06336 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
P06336 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.73■□□□□ 0.43
P06336 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
P06336 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
P06336 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
P06336 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
P06336 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
P06336 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
P06336 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
P06336 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
P06336 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
P06336 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms