Protein–RNA interactions for Protein: P01139

Ngf, Beta-nerve growth factor, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NgfP01139 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.15■□□□□ 0.34
NgfP01139 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.15■□□□□ 0.34
NgfP01139 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NgfP01139 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NgfP01139 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NgfP01139 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NgfP01139 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
NgfP01139 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
NgfP01139 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NgfP01139 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
NgfP01139 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
NgfP01139 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NgfP01139 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NgfP01139 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NgfP01139 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
NgfP01139 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.14■□□□□ 0.33
NgfP01139 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NgfP01139 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.14■□□□□ 0.33
NgfP01139 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NgfP01139 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NgfP01139 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NgfP01139 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NgfP01139 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NgfP01139 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NgfP01139 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NgfP01139 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.13■□□□□ 0.33
NgfP01139 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NgfP01139 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
NgfP01139 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NgfP01139 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NgfP01139 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
NgfP01139 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.12■□□□□ 0.33
NgfP01139 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NgfP01139 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
NgfP01139 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NgfP01139 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.12■□□□□ 0.33
NgfP01139 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NgfP01139 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
NgfP01139 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NgfP01139 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
NgfP01139 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NgfP01139 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.12■□□□□ 0.33
NgfP01139 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
NgfP01139 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NgfP01139 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NgfP01139 Gm20049-201ENSMUST00000219950 730 ntBASIC17.12■□□□□ 0.33
NgfP01139 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
NgfP01139 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NgfP01139 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.12■□□□□ 0.33
NgfP01139 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NgfP01139 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NgfP01139 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NgfP01139 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
NgfP01139 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
NgfP01139 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
NgfP01139 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.11■□□□□ 0.33
NgfP01139 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NgfP01139 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
NgfP01139 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NgfP01139 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NgfP01139 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NgfP01139 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NgfP01139 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
NgfP01139 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NgfP01139 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
NgfP01139 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.11■□□□□ 0.33
NgfP01139 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
NgfP01139 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.11■□□□□ 0.33
NgfP01139 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
NgfP01139 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NgfP01139 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
NgfP01139 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NgfP01139 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NgfP01139 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NgfP01139 Gm8520-201ENSMUST00000186517 868 ntBASIC17.1■□□□□ 0.33
NgfP01139 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NgfP01139 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
NgfP01139 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NgfP01139 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NgfP01139 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NgfP01139 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NgfP01139 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NgfP01139 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NgfP01139 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.09■□□□□ 0.33
NgfP01139 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NgfP01139 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NgfP01139 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.09■□□□□ 0.33
NgfP01139 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
NgfP01139 Gm22240-201ENSMUST00000175225 82 ntBASIC17.09■□□□□ 0.33
NgfP01139 Gm26524-201ENSMUST00000192339 390 ntBASIC17.09■□□□□ 0.33
NgfP01139 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NgfP01139 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
NgfP01139 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NgfP01139 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NgfP01139 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
NgfP01139 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
NgfP01139 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NgfP01139 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NgfP01139 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
NgfP01139 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms