Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Vti1aO89116 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vti1aO89116 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Vti1aO89116 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vti1aO89116 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.79■□□□□ 0.92
Vti1aO89116 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Vti1aO89116 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vti1aO89116 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vti1aO89116 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Vti1aO89116 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vti1aO89116 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vti1aO89116 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Vti1aO89116 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vti1aO89116 Gm27801-201ENSMUST00000184174 223 ntBASIC20.78■□□□□ 0.92
Vti1aO89116 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.78■□□□□ 0.92
Vti1aO89116 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vti1aO89116 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vti1aO89116 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vti1aO89116 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.78■□□□□ 0.92
Vti1aO89116 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Vti1aO89116 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vti1aO89116 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vti1aO89116 Gm27011-201ENSMUST00000182352 972 ntBASIC20.77■□□□□ 0.92
Vti1aO89116 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Vti1aO89116 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vti1aO89116 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Vti1aO89116 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.77■□□□□ 0.91
Vti1aO89116 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Vti1aO89116 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vti1aO89116 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Vti1aO89116 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vti1aO89116 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vti1aO89116 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vti1aO89116 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vti1aO89116 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Vti1aO89116 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vti1aO89116 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vti1aO89116 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Vti1aO89116 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Vti1aO89116 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Vti1aO89116 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Vti1aO89116 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vti1aO89116 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.74■□□□□ 0.91
Vti1aO89116 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.74■□□□□ 0.91
Vti1aO89116 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Vti1aO89116 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vti1aO89116 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vti1aO89116 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vti1aO89116 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vti1aO89116 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
Vti1aO89116 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vti1aO89116 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vti1aO89116 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vti1aO89116 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Vti1aO89116 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vti1aO89116 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vti1aO89116 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vti1aO89116 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vti1aO89116 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.73■□□□□ 0.91
Vti1aO89116 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vti1aO89116 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vti1aO89116 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.73■□□□□ 0.91
Vti1aO89116 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vti1aO89116 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.73■□□□□ 0.91
Vti1aO89116 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vti1aO89116 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Vti1aO89116 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vti1aO89116 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vti1aO89116 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
Vti1aO89116 Gm7514-201ENSMUST00000209475 934 ntBASIC20.72■□□□□ 0.91
Vti1aO89116 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vti1aO89116 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vti1aO89116 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vti1aO89116 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vti1aO89116 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Vti1aO89116 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vti1aO89116 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Vti1aO89116 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vti1aO89116 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.72■□□□□ 0.91
Vti1aO89116 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Vti1aO89116 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vti1aO89116 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Vti1aO89116 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vti1aO89116 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vti1aO89116 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vti1aO89116 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Vti1aO89116 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Vti1aO89116 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vti1aO89116 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Vti1aO89116 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vti1aO89116 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.71■□□□□ 0.91
Vti1aO89116 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vti1aO89116 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vti1aO89116 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vti1aO89116 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Vti1aO89116 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vti1aO89116 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vti1aO89116 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vti1aO89116 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Vti1aO89116 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms