Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Sh2d1aO88890 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sh2d1aO88890 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC13.59□□□□□ -0.23
Sh2d1aO88890 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sh2d1aO88890 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Sh2d1aO88890 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh2d1aO88890 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh2d1aO88890 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh2d1aO88890 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh2d1aO88890 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Sh2d1aO88890 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh2d1aO88890 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Sh2d1aO88890 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.23
Sh2d1aO88890 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC13.58□□□□□ -0.24
Sh2d1aO88890 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sh2d1aO88890 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Sh2d1aO88890 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sh2d1aO88890 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Sh2d1aO88890 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sh2d1aO88890 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sh2d1aO88890 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sh2d1aO88890 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sh2d1aO88890 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sh2d1aO88890 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sh2d1aO88890 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC13.58□□□□□ -0.24
Sh2d1aO88890 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sh2d1aO88890 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sh2d1aO88890 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sh2d1aO88890 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sh2d1aO88890 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sh2d1aO88890 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Sh2d1aO88890 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sh2d1aO88890 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Sh2d1aO88890 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sh2d1aO88890 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sh2d1aO88890 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC13.57□□□□□ -0.24
Sh2d1aO88890 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC13.57□□□□□ -0.24
Sh2d1aO88890 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC13.57□□□□□ -0.24
Sh2d1aO88890 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sh2d1aO88890 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sh2d1aO88890 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sh2d1aO88890 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sh2d1aO88890 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sh2d1aO88890 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sh2d1aO88890 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Sh2d1aO88890 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sh2d1aO88890 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sh2d1aO88890 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sh2d1aO88890 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Sh2d1aO88890 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sh2d1aO88890 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sh2d1aO88890 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Sh2d1aO88890 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sh2d1aO88890 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sh2d1aO88890 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sh2d1aO88890 AC140930.3-201ENSMUST00000222935 274 ntBASIC13.56□□□□□ -0.24
Sh2d1aO88890 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Sh2d1aO88890 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sh2d1aO88890 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sh2d1aO88890 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sh2d1aO88890 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sh2d1aO88890 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Sh2d1aO88890 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC13.56□□□□□ -0.24
Sh2d1aO88890 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Sh2d1aO88890 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sh2d1aO88890 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sh2d1aO88890 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC13.56□□□□□ -0.24
Sh2d1aO88890 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
Sh2d1aO88890 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sh2d1aO88890 Gm6085-201ENSMUST00000182774 1470 ntBASIC13.55□□□□□ -0.24
Sh2d1aO88890 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sh2d1aO88890 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sh2d1aO88890 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sh2d1aO88890 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sh2d1aO88890 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sh2d1aO88890 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sh2d1aO88890 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sh2d1aO88890 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sh2d1aO88890 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sh2d1aO88890 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sh2d1aO88890 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC13.55□□□□□ -0.24
Sh2d1aO88890 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC13.55□□□□□ -0.24
Sh2d1aO88890 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sh2d1aO88890 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC13.54□□□□□ -0.24
Sh2d1aO88890 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sh2d1aO88890 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sh2d1aO88890 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sh2d1aO88890 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sh2d1aO88890 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC13.54□□□□□ -0.24
Sh2d1aO88890 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC13.54□□□□□ -0.24
Sh2d1aO88890 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sh2d1aO88890 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC13.54□□□□□ -0.24
Sh2d1aO88890 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sh2d1aO88890 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sh2d1aO88890 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC13.54□□□□□ -0.24
Sh2d1aO88890 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sh2d1aO88890 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sh2d1aO88890 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sh2d1aO88890 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sh2d1aO88890 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms