Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lmx1bO88609 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.48■□□□□ 0.39
Lmx1bO88609 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lmx1bO88609 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lmx1bO88609 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Lmx1bO88609 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Lmx1bO88609 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lmx1bO88609 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Lmx1bO88609 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Lmx1bO88609 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lmx1bO88609 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Lmx1bO88609 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lmx1bO88609 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Lmx1bO88609 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lmx1bO88609 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Lmx1bO88609 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lmx1bO88609 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Lmx1bO88609 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.46■□□□□ 0.39
Lmx1bO88609 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lmx1bO88609 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lmx1bO88609 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lmx1bO88609 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.46■□□□□ 0.39
Lmx1bO88609 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.46■□□□□ 0.39
Lmx1bO88609 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lmx1bO88609 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.46■□□□□ 0.39
Lmx1bO88609 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lmx1bO88609 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Lmx1bO88609 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lmx1bO88609 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Lmx1bO88609 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Lmx1bO88609 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lmx1bO88609 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Lmx1bO88609 Reep4-203ENSMUST00000226563 1444 ntBASIC17.46■□□□□ 0.39
Lmx1bO88609 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Lmx1bO88609 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Lmx1bO88609 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lmx1bO88609 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Lmx1bO88609 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lmx1bO88609 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Lmx1bO88609 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Lmx1bO88609 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.45■□□□□ 0.38
Lmx1bO88609 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Lmx1bO88609 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Lmx1bO88609 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lmx1bO88609 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.45■□□□□ 0.38
Lmx1bO88609 Gm27801-201ENSMUST00000184174 223 ntBASIC17.45■□□□□ 0.38
Lmx1bO88609 Gm37179-201ENSMUST00000194862 823 ntBASIC17.45■□□□□ 0.38
Lmx1bO88609 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lmx1bO88609 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
Lmx1bO88609 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Lmx1bO88609 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lmx1bO88609 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lmx1bO88609 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Lmx1bO88609 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lmx1bO88609 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.44■□□□□ 0.38
Lmx1bO88609 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lmx1bO88609 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Lmx1bO88609 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lmx1bO88609 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Lmx1bO88609 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.44■□□□□ 0.38
Lmx1bO88609 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Lmx1bO88609 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lmx1bO88609 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lmx1bO88609 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lmx1bO88609 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lmx1bO88609 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lmx1bO88609 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.43■□□□□ 0.38
Lmx1bO88609 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.43■□□□□ 0.38
Lmx1bO88609 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lmx1bO88609 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lmx1bO88609 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.43■□□□□ 0.38
Lmx1bO88609 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lmx1bO88609 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.43■□□□□ 0.38
Lmx1bO88609 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lmx1bO88609 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lmx1bO88609 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lmx1bO88609 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lmx1bO88609 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Lmx1bO88609 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lmx1bO88609 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lmx1bO88609 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lmx1bO88609 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lmx1bO88609 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Lmx1bO88609 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.42■□□□□ 0.38
Lmx1bO88609 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
Lmx1bO88609 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Lmx1bO88609 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lmx1bO88609 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lmx1bO88609 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.42■□□□□ 0.38
Lmx1bO88609 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.42■□□□□ 0.38
Lmx1bO88609 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lmx1bO88609 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Lmx1bO88609 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Lmx1bO88609 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lmx1bO88609 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lmx1bO88609 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lmx1bO88609 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
Lmx1bO88609 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lmx1bO88609 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.4■□□□□ 0.38
Lmx1bO88609 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms