Protein–RNA interactions for Protein: O88552

Cldn2, Claudin-2, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn2O88552 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cldn2O88552 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cldn2O88552 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.73■□□□□ 0.75
Cldn2O88552 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cldn2O88552 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cldn2O88552 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cldn2O88552 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Cldn2O88552 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.73■□□□□ 0.75
Cldn2O88552 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cldn2O88552 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.73■□□□□ 0.75
Cldn2O88552 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cldn2O88552 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cldn2O88552 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Cldn2O88552 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.72■□□□□ 0.75
Cldn2O88552 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Cldn2O88552 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cldn2O88552 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cldn2O88552 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cldn2O88552 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.71■□□□□ 0.75
Cldn2O88552 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.71■□□□□ 0.75
Cldn2O88552 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cldn2O88552 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Cldn2O88552 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cldn2O88552 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.71■□□□□ 0.75
Cldn2O88552 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Cldn2O88552 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cldn2O88552 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.71■□□□□ 0.75
Cldn2O88552 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cldn2O88552 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cldn2O88552 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cldn2O88552 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Cldn2O88552 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cldn2O88552 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cldn2O88552 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Cldn2O88552 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cldn2O88552 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cldn2O88552 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cldn2O88552 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cldn2O88552 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cldn2O88552 Gm5408-201ENSMUST00000197998 747 ntBASIC19.7■□□□□ 0.74
Cldn2O88552 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cldn2O88552 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cldn2O88552 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cldn2O88552 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cldn2O88552 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cldn2O88552 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cldn2O88552 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cldn2O88552 Gm7860-201ENSMUST00000121190 879 ntBASIC19.69■□□□□ 0.74
Cldn2O88552 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cldn2O88552 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cldn2O88552 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Cldn2O88552 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cldn2O88552 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cldn2O88552 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.69■□□□□ 0.74
Cldn2O88552 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Cldn2O88552 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Cldn2O88552 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cldn2O88552 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cldn2O88552 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.68■□□□□ 0.74
Cldn2O88552 Gm12527-201ENSMUST00000117967 564 ntBASIC19.68■□□□□ 0.74
Cldn2O88552 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cldn2O88552 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cldn2O88552 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cldn2O88552 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cldn2O88552 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.68■□□□□ 0.74
Cldn2O88552 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cldn2O88552 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cldn2O88552 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cldn2O88552 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Cldn2O88552 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cldn2O88552 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cldn2O88552 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cldn2O88552 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Cldn2O88552 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cldn2O88552 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.67■□□□□ 0.74
Cldn2O88552 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Cldn2O88552 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.67■□□□□ 0.74
Cldn2O88552 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cldn2O88552 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cldn2O88552 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cldn2O88552 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cldn2O88552 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cldn2O88552 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cldn2O88552 Gm7290-201ENSMUST00000104990 617 ntBASIC19.66■□□□□ 0.74
Cldn2O88552 Gm12918-201ENSMUST00000120234 636 ntBASIC19.66■□□□□ 0.74
Cldn2O88552 Gm15710-201ENSMUST00000121821 636 ntBASIC19.66■□□□□ 0.74
Cldn2O88552 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cldn2O88552 Gm5075-201ENSMUST00000196916 622 ntBASIC19.66■□□□□ 0.74
Cldn2O88552 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.66■□□□□ 0.74
Cldn2O88552 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.66■□□□□ 0.74
Cldn2O88552 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Cldn2O88552 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cldn2O88552 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cldn2O88552 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Cldn2O88552 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Cldn2O88552 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cldn2O88552 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.65■□□□□ 0.74
Cldn2O88552 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cldn2O88552 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cldn2O88552 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms