Protein–RNA interactions for Protein: O88520

Shoc2, Leucine-rich repeat protein SHOC-2, mousemouse

Known RBP Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shoc2O88520 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.91■□□□□ 0.78
Shoc2O88520 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Shoc2O88520 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Shoc2O88520 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.91■□□□□ 0.78
Shoc2O88520 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Shoc2O88520 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Shoc2O88520 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Shoc2O88520 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Shoc2O88520 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Shoc2O88520 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Shoc2O88520 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.9■□□□□ 0.78
Shoc2O88520 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
Shoc2O88520 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Shoc2O88520 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
Shoc2O88520 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Shoc2O88520 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Shoc2O88520 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Shoc2O88520 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Shoc2O88520 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Shoc2O88520 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
Shoc2O88520 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Shoc2O88520 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Shoc2O88520 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Shoc2O88520 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Shoc2O88520 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.89■□□□□ 0.77
Shoc2O88520 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Shoc2O88520 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Shoc2O88520 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Shoc2O88520 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.89■□□□□ 0.77
Shoc2O88520 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Shoc2O88520 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Shoc2O88520 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Shoc2O88520 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Shoc2O88520 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Shoc2O88520 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Shoc2O88520 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Shoc2O88520 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Shoc2O88520 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.88■□□□□ 0.77
Shoc2O88520 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Shoc2O88520 Gm43173-201ENSMUST00000202246 593 ntBASIC19.88■□□□□ 0.77
Shoc2O88520 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Shoc2O88520 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Shoc2O88520 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Shoc2O88520 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Shoc2O88520 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shoc2O88520 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shoc2O88520 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shoc2O88520 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shoc2O88520 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shoc2O88520 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shoc2O88520 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Shoc2O88520 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Shoc2O88520 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shoc2O88520 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.87■□□□□ 0.77
Shoc2O88520 Gm43017-201ENSMUST00000198296 752 ntBASIC19.87■□□□□ 0.77
Shoc2O88520 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.86■□□□□ 0.77
Shoc2O88520 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.86■□□□□ 0.77
Shoc2O88520 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Shoc2O88520 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Shoc2O88520 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Shoc2O88520 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.86■□□□□ 0.77
Shoc2O88520 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Shoc2O88520 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Shoc2O88520 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Shoc2O88520 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Shoc2O88520 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Shoc2O88520 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Shoc2O88520 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Shoc2O88520 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Shoc2O88520 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Shoc2O88520 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Shoc2O88520 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Shoc2O88520 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Shoc2O88520 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Shoc2O88520 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Shoc2O88520 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
Shoc2O88520 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Shoc2O88520 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Shoc2O88520 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Shoc2O88520 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Shoc2O88520 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.84■□□□□ 0.77
Shoc2O88520 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Shoc2O88520 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.84■□□□□ 0.77
Shoc2O88520 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Shoc2O88520 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Shoc2O88520 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.84■□□□□ 0.77
Shoc2O88520 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Shoc2O88520 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Shoc2O88520 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Shoc2O88520 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
Shoc2O88520 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Shoc2O88520 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Shoc2O88520 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.84■□□□□ 0.77
Shoc2O88520 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.84■□□□□ 0.77
Shoc2O88520 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Shoc2O88520 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.83■□□□□ 0.77
Shoc2O88520 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Shoc2O88520 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Shoc2O88520 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.83■□□□□ 0.77
Shoc2O88520 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms