Protein–RNA interactions for Protein: O70507

Hcn4, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4, mousemouse

Predictions only

Length 1,186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn4O70507 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hcn4O70507 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hcn4O70507 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Hcn4O70507 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hcn4O70507 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hcn4O70507 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Hcn4O70507 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Hcn4O70507 Gm13146-201ENSMUST00000118508 780 ntBASIC20.47■□□□□ 0.87
Hcn4O70507 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC20.47■□□□□ 0.87
Hcn4O70507 Gm10231-201ENSMUST00000181584 441 ntBASIC20.47■□□□□ 0.87
Hcn4O70507 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hcn4O70507 Gm43799-201ENSMUST00000201845 579 ntBASIC20.47■□□□□ 0.87
Hcn4O70507 Gm10175-202ENSMUST00000208752 441 ntBASIC20.47■□□□□ 0.87
Hcn4O70507 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hcn4O70507 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hcn4O70507 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Hcn4O70507 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
Hcn4O70507 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hcn4O70507 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.47■□□□□ 0.87
Hcn4O70507 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hcn4O70507 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hcn4O70507 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Hcn4O70507 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Hcn4O70507 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hcn4O70507 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hcn4O70507 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Hcn4O70507 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hcn4O70507 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hcn4O70507 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Hcn4O70507 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hcn4O70507 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Hcn4O70507 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.46■□□□□ 0.87
Hcn4O70507 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hcn4O70507 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Hcn4O70507 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.45■□□□□ 0.87
Hcn4O70507 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.45■□□□□ 0.87
Hcn4O70507 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.45■□□□□ 0.86
Hcn4O70507 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Hcn4O70507 Gm12896-201ENSMUST00000118430 226 ntBASIC20.45■□□□□ 0.86
Hcn4O70507 Gm9484-201ENSMUST00000195892 1159 ntBASIC20.45■□□□□ 0.86
Hcn4O70507 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hcn4O70507 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hcn4O70507 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hcn4O70507 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hcn4O70507 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hcn4O70507 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Hcn4O70507 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hcn4O70507 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.44■□□□□ 0.86
Hcn4O70507 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
Hcn4O70507 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Hcn4O70507 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
Hcn4O70507 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Hcn4O70507 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hcn4O70507 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hcn4O70507 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Hcn4O70507 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hcn4O70507 Gm6728-201ENSMUST00000178117 1065 ntBASIC20.43■□□□□ 0.86
Hcn4O70507 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hcn4O70507 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hcn4O70507 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Hcn4O70507 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hcn4O70507 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hcn4O70507 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hcn4O70507 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hcn4O70507 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hcn4O70507 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Hcn4O70507 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hcn4O70507 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hcn4O70507 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.41■□□□□ 0.86
Hcn4O70507 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hcn4O70507 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hcn4O70507 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hcn4O70507 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
Hcn4O70507 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.41■□□□□ 0.86
Hcn4O70507 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hcn4O70507 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hcn4O70507 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Hcn4O70507 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Hcn4O70507 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.41■□□□□ 0.86
Hcn4O70507 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC20.41■□□□□ 0.86
Hcn4O70507 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hcn4O70507 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Hcn4O70507 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hcn4O70507 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hcn4O70507 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hcn4O70507 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hcn4O70507 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Hcn4O70507 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Hcn4O70507 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.4■□□□□ 0.86
Hcn4O70507 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.4■□□□□ 0.86
Hcn4O70507 AC153881.1-201ENSMUST00000214448 284 ntBASIC20.4■□□□□ 0.86
Hcn4O70507 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Hcn4O70507 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hcn4O70507 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.4■□□□□ 0.86
Hcn4O70507 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.4■□□□□ 0.86
Hcn4O70507 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hcn4O70507 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hcn4O70507 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Hcn4O70507 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hcn4O70507 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms