Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pdlim1O70400 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.05■□□□□ 0.64
Pdlim1O70400 Gm10493-201ENSMUST00000097270 612 ntBASIC19.05■□□□□ 0.64
Pdlim1O70400 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Pdlim1O70400 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pdlim1O70400 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
Pdlim1O70400 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pdlim1O70400 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pdlim1O70400 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.05■□□□□ 0.64
Pdlim1O70400 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pdlim1O70400 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.04■□□□□ 0.64
Pdlim1O70400 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pdlim1O70400 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pdlim1O70400 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.04■□□□□ 0.64
Pdlim1O70400 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pdlim1O70400 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pdlim1O70400 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pdlim1O70400 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pdlim1O70400 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.03■□□□□ 0.64
Pdlim1O70400 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pdlim1O70400 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pdlim1O70400 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pdlim1O70400 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pdlim1O70400 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pdlim1O70400 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.03■□□□□ 0.64
Pdlim1O70400 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.03■□□□□ 0.64
Pdlim1O70400 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pdlim1O70400 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pdlim1O70400 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pdlim1O70400 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pdlim1O70400 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.03■□□□□ 0.64
Pdlim1O70400 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pdlim1O70400 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
Pdlim1O70400 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pdlim1O70400 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pdlim1O70400 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Pdlim1O70400 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Pdlim1O70400 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.02■□□□□ 0.64
Pdlim1O70400 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pdlim1O70400 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Pdlim1O70400 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.02■□□□□ 0.64
Pdlim1O70400 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.02■□□□□ 0.64
Pdlim1O70400 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pdlim1O70400 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Pdlim1O70400 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pdlim1O70400 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Pdlim1O70400 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pdlim1O70400 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Pdlim1O70400 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.02■□□□□ 0.63
Pdlim1O70400 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pdlim1O70400 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pdlim1O70400 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pdlim1O70400 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Pdlim1O70400 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Pdlim1O70400 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pdlim1O70400 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Pdlim1O70400 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pdlim1O70400 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.01■□□□□ 0.63
Pdlim1O70400 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Pdlim1O70400 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.01■□□□□ 0.63
Pdlim1O70400 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.01■□□□□ 0.63
Pdlim1O70400 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pdlim1O70400 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pdlim1O70400 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.01■□□□□ 0.63
Pdlim1O70400 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Pdlim1O70400 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Pdlim1O70400 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.01■□□□□ 0.63
Pdlim1O70400 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Pdlim1O70400 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Pdlim1O70400 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Pdlim1O70400 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pdlim1O70400 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19■□□□□ 0.63
Pdlim1O70400 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pdlim1O70400 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pdlim1O70400 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pdlim1O70400 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pdlim1O70400 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pdlim1O70400 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pdlim1O70400 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.99■□□□□ 0.63
Pdlim1O70400 Gm18284-201ENSMUST00000172604 624 ntBASIC18.99■□□□□ 0.63
Pdlim1O70400 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.99■□□□□ 0.63
Pdlim1O70400 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.99■□□□□ 0.63
Pdlim1O70400 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pdlim1O70400 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.99■□□□□ 0.63
Pdlim1O70400 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pdlim1O70400 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pdlim1O70400 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pdlim1O70400 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pdlim1O70400 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pdlim1O70400 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.98■□□□□ 0.63
Pdlim1O70400 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pdlim1O70400 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pdlim1O70400 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pdlim1O70400 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pdlim1O70400 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pdlim1O70400 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pdlim1O70400 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
Pdlim1O70400 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pdlim1O70400 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pdlim1O70400 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms