Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.4■■□□□ 1.02
Trdmt1O55055 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trdmt1O55055 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trdmt1O55055 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
Trdmt1O55055 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC21.4■■□□□ 1.02
Trdmt1O55055 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trdmt1O55055 AC135637.1-201ENSMUST00000227750 365 ntBASIC21.4■■□□□ 1.02
Trdmt1O55055 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trdmt1O55055 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trdmt1O55055 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Trdmt1O55055 AC131586.2-201ENSMUST00000228370 1512 ntBASIC21.39■■□□□ 1.02
Trdmt1O55055 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.39■■□□□ 1.02
Trdmt1O55055 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Trdmt1O55055 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Trdmt1O55055 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Trdmt1O55055 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trdmt1O55055 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC21.39■■□□□ 1.01
Trdmt1O55055 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC21.39■■□□□ 1.01
Trdmt1O55055 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC21.39■■□□□ 1.01
Trdmt1O55055 Gm37856-201ENSMUST00000191634 999 ntBASIC21.39■■□□□ 1.01
Trdmt1O55055 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trdmt1O55055 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trdmt1O55055 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC21.39■■□□□ 1.01
Trdmt1O55055 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC21.38■■□□□ 1.01
Trdmt1O55055 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trdmt1O55055 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Trdmt1O55055 Gm13168-201ENSMUST00000121771 632 ntBASIC21.38■■□□□ 1.01
Trdmt1O55055 Gm27032-201ENSMUST00000183124 1116 ntBASIC21.38■■□□□ 1.01
Trdmt1O55055 Gm26524-201ENSMUST00000192339 390 ntBASIC21.38■■□□□ 1.01
Trdmt1O55055 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Trdmt1O55055 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Trdmt1O55055 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.37■■□□□ 1.01
Trdmt1O55055 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trdmt1O55055 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.37■■□□□ 1.01
Trdmt1O55055 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trdmt1O55055 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Trdmt1O55055 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Trdmt1O55055 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC21.37■■□□□ 1.01
Trdmt1O55055 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trdmt1O55055 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trdmt1O55055 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trdmt1O55055 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Trdmt1O55055 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trdmt1O55055 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC21.36■■□□□ 1.01
Trdmt1O55055 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Trdmt1O55055 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
Trdmt1O55055 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC21.36■■□□□ 1.01
Trdmt1O55055 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Trdmt1O55055 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Trdmt1O55055 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trdmt1O55055 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC21.36■■□□□ 1.01
Trdmt1O55055 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trdmt1O55055 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC21.35■■□□□ 1.01
Trdmt1O55055 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trdmt1O55055 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Trdmt1O55055 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trdmt1O55055 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC21.35■■□□□ 1.01
Trdmt1O55055 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trdmt1O55055 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC21.35■■□□□ 1.01
Trdmt1O55055 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC21.35■■□□□ 1.01
Trdmt1O55055 Gm10252-201ENSMUST00000209541 832 ntBASIC21.35■■□□□ 1.01
Trdmt1O55055 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC21.35■■□□□ 1.01
Trdmt1O55055 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trdmt1O55055 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Trdmt1O55055 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trdmt1O55055 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Trdmt1O55055 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trdmt1O55055 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC21.35■■□□□ 1.01
Trdmt1O55055 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trdmt1O55055 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trdmt1O55055 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Trdmt1O55055 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Trdmt1O55055 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
Trdmt1O55055 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trdmt1O55055 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Trdmt1O55055 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Trdmt1O55055 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Trdmt1O55055 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Trdmt1O55055 Gm44672-201ENSMUST00000206944 1098 ntBASIC21.34■■□□□ 1.01
Trdmt1O55055 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trdmt1O55055 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trdmt1O55055 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC21.34■■□□□ 1.01
Trdmt1O55055 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Trdmt1O55055 Gm37563-201ENSMUST00000192580 1513 ntBASIC21.34■■□□□ 1.01
Trdmt1O55055 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Trdmt1O55055 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trdmt1O55055 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Trdmt1O55055 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trdmt1O55055 Rab3c-203ENSMUST00000224180 967 ntBASIC21.33■■□□□ 1.01
Trdmt1O55055 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trdmt1O55055 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trdmt1O55055 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
Trdmt1O55055 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.33■■□□□ 1
Trdmt1O55055 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Trdmt1O55055 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Trdmt1O55055 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Trdmt1O55055 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Trdmt1O55055 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trdmt1O55055 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trdmt1O55055 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms