Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SncaO55042 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC15.94■□□□□ 0.14
SncaO55042 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC15.94■□□□□ 0.14
SncaO55042 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SncaO55042 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SncaO55042 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SncaO55042 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC15.94■□□□□ 0.14
SncaO55042 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SncaO55042 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SncaO55042 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC15.94■□□□□ 0.14
SncaO55042 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SncaO55042 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
SncaO55042 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SncaO55042 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SncaO55042 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC15.94■□□□□ 0.14
SncaO55042 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SncaO55042 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SncaO55042 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SncaO55042 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SncaO55042 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SncaO55042 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC15.93■□□□□ 0.14
SncaO55042 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SncaO55042 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SncaO55042 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SncaO55042 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SncaO55042 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
SncaO55042 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SncaO55042 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SncaO55042 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SncaO55042 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SncaO55042 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
SncaO55042 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SncaO55042 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SncaO55042 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC15.92■□□□□ 0.14
SncaO55042 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC15.92■□□□□ 0.14
SncaO55042 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
SncaO55042 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SncaO55042 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SncaO55042 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC15.92■□□□□ 0.14
SncaO55042 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SncaO55042 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SncaO55042 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
SncaO55042 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SncaO55042 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SncaO55042 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
SncaO55042 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SncaO55042 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SncaO55042 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC15.91■□□□□ 0.14
SncaO55042 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC15.91■□□□□ 0.14
SncaO55042 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC15.91■□□□□ 0.14
SncaO55042 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SncaO55042 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SncaO55042 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SncaO55042 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SncaO55042 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SncaO55042 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SncaO55042 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SncaO55042 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SncaO55042 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SncaO55042 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SncaO55042 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SncaO55042 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SncaO55042 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SncaO55042 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SncaO55042 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SncaO55042 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SncaO55042 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SncaO55042 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SncaO55042 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
SncaO55042 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SncaO55042 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SncaO55042 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SncaO55042 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC15.89■□□□□ 0.13
SncaO55042 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC15.89■□□□□ 0.13
SncaO55042 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SncaO55042 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SncaO55042 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC15.89■□□□□ 0.13
SncaO55042 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SncaO55042 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SncaO55042 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SncaO55042 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC15.88■□□□□ 0.13
SncaO55042 Gm43759-201ENSMUST00000196925 1261 ntBASIC15.88■□□□□ 0.13
SncaO55042 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SncaO55042 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
SncaO55042 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SncaO55042 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SncaO55042 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SncaO55042 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SncaO55042 Gm10461-201ENSMUST00000202073 4786 ntBASIC15.88■□□□□ 0.13
SncaO55042 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SncaO55042 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SncaO55042 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SncaO55042 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SncaO55042 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SncaO55042 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
SncaO55042 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SncaO55042 Gm22238-201ENSMUST00000175222 88 ntBASIC15.87■□□□□ 0.13
SncaO55042 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SncaO55042 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SncaO55042 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms